RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 TRIM25Q14258 630 aaKnown RBP15.25■□□□□ 0.03
LRRK1-207ENST00000531270 TTC39BQ5VTQ0 682 aaPredicted RBP15.25■□□□□ 0.03
LRRK1-207ENST00000531270 TDRD10Q5VZ19 366 aaKnown RBP15.25■□□□□ 0.03
LRRK1-207ENST00000531270 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
LRRK1-207ENST00000531270 TRMT6Q9UJA5 497 aaKnown RBP15.25■□□□□ 0.03
LRRK1-207ENST00000531270 APPL1Q9UKG1 709 aa15.25■□□□□ 0.03
LRRK1-207ENST00000531270 SMG5Q9UPR3 1016 aaKnown RBP15.25■□□□□ 0.03
LRRK1-207ENST00000531270 WDR62O43379 1518 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 SKAP2O75563 359 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ATP6V1B1P15313 513 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CYP2C19P33261 490 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CAMK2GQ13555 558 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CYP51A1Q16850 503 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 AASDHQ4L235 1098 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 KCTD10Q9H3F6 313 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 OSBPL3Q9H4L5 887 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 RPAP1Q9BWH6 1393 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 TMED10P49755 219 aaKnown RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 PTK6Q13882 451 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 SPATA18Q8TC71 538 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 SNRNP27Q8WVK2 155 aaKnown RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CMTM5Q96DZ9 223 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 NFKBIZQ9BYH8 718 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ZFYVE28Q9HCC9 887 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 SYBUQ9NX95 663 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 RNF112Q9ULX5 631 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 IQCA1LA6NCM1 817 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 STX7O15400 261 aaKnown RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 YWHAQP27348 245 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 WLSQ5T9L3 541 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CCDC149Q6ZUS6 474 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ZNF438Q7Z4V0 828 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ZNF669Q96BR6 464 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ERP27Q96DN0 273 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CYP39A1Q9NYL5 469 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 MKL2Q9ULH7 1088 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 DYRK3O43781 588 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 STRNO43815 780 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ZNF189O75820 626 aaPredicted RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ASS1P00966 412 aaKnown RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CSTF3Q12996 717 aaKnown RBP15.24■□□□□ 0.03
LRRK1-207ENST00000531270 CARNMT1Q8N4J0 409 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ENTPD7Q9NQZ7 604 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 KLK14Q9P0G3 267 aa15.24■□□□□ 0.03
LRRK1-207ENST00000531270 ENO4A6NNW6 628 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 STXBP3O00186 592 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 CD4P01730 458 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 PDK1Q15118 436 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 FAM71DQ8N9W8 422 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 KRT35Q92764 455 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 EIF3LQ9Y262 564 aaKnown RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 ADGRG1Q9Y653 693 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 NFICP08651 508 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 WEE1P30291 646 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 CSNK2BP67870 215 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 EMC2Q15006 297 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 TTC33Q6PID6 262 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 ZNF786Q8N393 782 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 OSGEPL1Q9H4B0 414 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 APEX2Q9UBZ4 518 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 SMNDC1O75940 238 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 CHRNA5P30532 468 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 RRM2P31350 389 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 MTF1Q14872 753 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 BCL2L14Q9BZR8 327 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 CHORDC1Q9UHD1 332 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 SOAT2O75908 522 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 KLHL2O95198 593 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 EIF2S1P05198 315 aaKnown RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 EPC2Q52LR7 807 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 CENPLQ8N0S6 344 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 ERLEC1Q96DZ1 483 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 NT5C1AQ9BXI3 368 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 TUFT1Q9NNX1 390 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 SESN1Q9Y6P5 492 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 TMEM2Q9UHN6 1383 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 NBPF26B4DH59 902 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 ZNF177Q13360 481 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 PIGHQ14442 188 aaPredicted RBP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 STILQ15468 1287 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 NFIL3Q16649 462 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 ATF7IP2Q5U623 682 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 NBPF15Q8N660 670 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 EXD1Q8NHP7 514 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRRK1-207ENST00000531270 SMARCAL1Q9NZC9 954 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 PADI4Q9UM07 663 aa15.23■□□□□ 0.03
LRRK1-207ENST00000531270 TK2O00142 265 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 AGTP01019 485 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 GPD1P21695 349 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 PTGER2P43116 358 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 BYSLQ13895 437 aaKnown RBP15.22■□□□□ 0.03
LRRK1-207ENST00000531270 SNRNP35Q16560 246 aaKnown RBP15.22■□□□□ 0.03
LRRK1-207ENST00000531270 CACHD1Q5VU97 1274 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 EFCAB12Q6NXP0 572 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 POTEAQ6S8J7 498 aa15.22■□□□□ 0.03
LRRK1-207ENST00000531270 SYDE1Q6ZW31 735 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms