RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TXLNAP40222 546 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 DMWDQ09019 674 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 BFSP1Q12934 665 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 SRSF5Q13243 272 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 GAS6Q14393 721 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 DGKKQ5KSL6 1271 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 C2orf15Q8WU43 125 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 FIZ1Q96SL8 496 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 MRPL44Q9H9J2 332 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 MAGED2Q9UNF1 606 aaPredicted RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 TSC2P49815 1807 aa17.07■□□□□ 0.32
CHMP4A-204ENST00000530996 IL18RAPO95256 599 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 RETP07949 1114 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 DDIT3P35638 169 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 TFAMQ00059 246 aaKnown RBP17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 SMARCB1Q12824 385 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 PTPAQ15257 358 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 MAMSTRQ6ZN01 415 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 EFCAB13Q8IY85 973 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 STKLD1Q8NE28 680 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 HVCN1Q96D96 273 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 FAM213AQ9BRX8 229 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 RTKNQ9BST9 563 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 IKZF4Q9H2S9 585 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 EXOC7Q9UPT5 735 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 PCDHB5Q9Y5E4 795 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 DNAH14Q0VDD8 3507 aa17.06■□□□□ 0.32
CHMP4A-204ENST00000530996 NCOR2Q9Y618 2525 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 DCDC2BA2VCK2 349 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 KPNA7A9QM74 516 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 GCNT3O95395 438 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 HAPLN1P10915 354 aaPredicted RBP17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 POLR2BP30876 1174 aaKnown RBP17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 PNPLA4P41247 253 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 POSTNQ15063 836 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 LONP2Q86WA8 852 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 SYCP3Q8IZU3 236 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 MAB21L3Q8N8X9 362 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 SAAL1Q96ER3 474 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 LRRC3BQ96PB8 259 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 F5P12259 2224 aa17.05■□□□□ 0.32
CHMP4A-204ENST00000530996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 HUS1O60921 280 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 IDEP14735 1019 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 GPR15P49685 360 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 CC2D1AQ6P1N0 951 aaPredicted RBP17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 CMTM8Q8IZV2 173 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 NETO1Q8TDF5 533 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 MRPS31Q92665 395 aaKnown RBP17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 ST6GALNAC4Q9H4F1 302 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 IL21Q9HBE4 155 aa17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 RBAKQ9NYW8 714 aaPredicted RBP17.04■□□□□ 0.32
CHMP4A-204ENST00000530996 K7ESF4 209 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 PAPSS2O95340 614 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 ITGB3P05106 788 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 CENPBP07199 599 aaPredicted RBP17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 KRT19P08727 400 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 GAP43P17677 238 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 CNR2P34972 360 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 GRSF1Q12849 480 aaKnown RBP eCLIP17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 WDR44Q5JSH3 913 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 L1TD1Q5T7N2 865 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 SDHAF4Q5VUM1 108 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 RRAGBQ5VZM2 374 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 TRIM68Q6AZZ1 485 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 USP49Q70CQ1 688 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 ZNF720Q7Z2F6 126 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 LRRTM3Q86VH5 581 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 SLC46A2Q9BY10 475 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 KIF9Q9HAQ2 790 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 TRPC7Q9HCX4 862 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 SEMA4GQ9NTN9 838 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 C2orf42Q9NWW7 574 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 SEL1LQ9UBV2 794 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 ZMYM5Q9UJ78 669 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 AGAP1Q9UPQ3 857 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 R3HCC1Q9Y3T6 440 aaKnown RBP17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 STYXL1Q9Y6J8 313 aa17.03■□□□□ 0.32
CHMP4A-204ENST00000530996 HRO43593 1189 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 LRP3O75074 770 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 TMEM191BP0C7N4 346 aa17.02■□□□□ 0.32
CHMP4A-204ENST00000530996 CSH1P0DML2 217 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms