RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 FRMPD2Q68DX3 1309 aaPredicted RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 PRAMEF33A0A0G2JMD5 474 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 A0A1W2PS29 197 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 TPP1O14773 563 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 ERC2O15083 957 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 MARCH6O60337 910 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 PRAMEF10O60809 474 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 VPS4BO75351 444 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 CDKL5O76039 1030 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 ABHD16AO95870 558 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 ANXA1P04083 346 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 HRGP04196 525 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 SPATA31D3P0C874 917 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 KCNA2P16389 499 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 ATF3P18847 181 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 MAKP20794 623 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 PROZP22891 400 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 PTGS2P35354 604 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 MPLP40238 635 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 IL12RB1P42701 662 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 VAV2P52735 878 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 COL10A1Q03692 680 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 CNN3Q15417 329 aaKnown RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 GFOD2Q3B7J2 385 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 CCDC157Q569K6 752 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 SP5Q6BEB4 398 aaPredicted RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 TAF2Q6P1X5 1199 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 TSHZ1Q6ZSZ6 1077 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 SPATA31D4Q6ZUB0 917 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 DAAM2Q86T65 1068 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 GPR150Q8NGU9 434 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 NEU4Q8WWR8 484 aaPredicted RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 RNF31Q96EP0 1072 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 MED15Q96RN5 788 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 TRIB1Q96RU8 372 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 TRIM54Q9BYV2 358 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 DPH1Q9BZG8 443 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 TINAGL1Q9GZM7 467 aaPredicted RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 DDX21Q9NR30 783 aaKnown RBP eCLIP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 STK32BQ9NY57 414 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 CFAP97Q9P2B7 532 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 FEZ2Q9UHY8 353 aaPredicted RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 MED16Q9Y2X0 877 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 CDC42BPBQ9Y5S2 1711 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 KIF14Q15058 1648 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 ABCA9Q8IUA7 1624 aa3.29□□□□□ -1.88
PTPN11-203ENST00000530818 CDK13Q14004 1512 aaKnown RBP3.29□□□□□ -1.88
PTPN11-203ENST00000530818 FHOD3Q2V2M9 1422 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ARID4BQ4LE39 1312 aaPredicted RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 CCDC195A0A1B0GUA6 201 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 VWC2LB2RUY7 222 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 TMEM233B4DJY2 109 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 POLRMTO00411 1230 aaKnown RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 TBX3O15119 743 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 FOXN1O15353 648 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ZBED1O96006 694 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ERBB2P04626 1255 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 U2AF1L5P0DN76 240 aaPredicted RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 RHCEP18577 417 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 CHRM3P20309 590 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ADRA1BP35368 520 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ZNF134P52741 427 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 GPSM2P81274 684 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 U2AF1Q01081 240 aaKnown RBP eCLIP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 SP2Q02086 613 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 GUCY1B3Q02153 619 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 RHDQ02161 417 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 CTBP1Q13363 440 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 SEMA5AQ13591 1074 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 LY6G5CQ5SRR4 150 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 TAPT1Q6NXT6 567 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 Q6YL49 198 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 DGKHQ86XP1 1220 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ADGRG5Q8IZF4 528 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 PCSK9Q8NBP7 692 aaKnown RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 BEND2Q8NDZ0 799 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 FAM46DQ8NEK8 389 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 SLC30A5Q8TAD4 765 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 LINC00476Q8WZB0 136 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 C8orf48Q96LL4 319 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 Q96MF0 132 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 REXO4Q9GZR2 422 aaKnown RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 TMPRSS5Q9H3S3 457 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 GALNT9Q9HCQ5 603 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 GNL3LQ9NVN8 582 aaKnown RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 CPNE7Q9UBL6 633 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 MTO1Q9Y2Z2 717 aaKnown RBP3.28□□□□□ -1.88
PTPN11-203ENST00000530818 SAMD9Q5K651 1589 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 PTPRMP28827 1452 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 TEX14Q8IWB6 1497 aa3.28□□□□□ -1.88
PTPN11-203ENST00000530818 MYO5CQ9NQX4 1742 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 C3P01024 1663 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 GOLGA6CA6NDK9 693 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 GOLGA6BA6NDN3 693 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 CAPN8A6NHC0 703 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 M0QYG6 137 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 ERN1O75460 977 aaKnown RBP3.27□□□□□ -1.89
PTPN11-203ENST00000530818 UNC5CO95185 931 aa3.27□□□□□ -1.89
PTPN11-203ENST00000530818 GNAI3P08754 354 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms