RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 UBR7Q8N806 425 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 OR10T2Q8NGX3 314 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 ERGIC2Q96RQ1 377 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 PKMYT1Q99640 499 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 ZCWPW1Q9H0M4 648 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 SMYD3Q9H7B4 428 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 SIX2Q9NPC8 291 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 DDX43Q9NXZ2 648 aaKnown RBP17.15■□□□□ 0.34
BRK1-201ENST00000530758 CDH9Q9ULB4 789 aa17.15■□□□□ 0.34
BRK1-201ENST00000530758 BRWD1Q9NSI6 2320 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 PER2O15055 1255 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 RPL17P18621 184 aaKnown RBP17.14■□□□□ 0.33
BRK1-201ENST00000530758 KLRC2P26717 231 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 PCSK1P29120 753 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 NRIP1P48552 1158 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 ROR1Q01973 937 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 ADAM15Q13444 863 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 GAS2L3Q86XJ1 694 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 CRYBG2Q8N1P7 616 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 CRACR2AQ9BSW2 395 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 PLCB1Q9NQ66 1216 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 HSFX1Q9UBD0 423 aa17.14■□□□□ 0.33
BRK1-201ENST00000530758 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
BRK1-201ENST00000530758 WDR27A2RRH5 827 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 TGM5O43548 720 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 CILPO75339 1184 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 WEE2P0C1S8 567 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 ATF2P15336 505 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 FANCCQ00597 558 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 FILIP1LQ4L180 1135 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
BRK1-201ENST00000530758 ENOSF1Q7L5Y1 443 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
BRK1-201ENST00000530758 LRRTM3Q86VH5 581 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 OR6B3Q8NGW1 331 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 C2orf15Q8WU43 125 aaKnown RBP17.13■□□□□ 0.33
BRK1-201ENST00000530758 NAP1L5Q96NT1 182 aaPredicted RBP17.13■□□□□ 0.33
BRK1-201ENST00000530758 SNX25Q9H3E2 840 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 APEX2Q9UBZ4 518 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 AFF4Q9UHB7 1163 aaKnown RBP17.13■□□□□ 0.33
BRK1-201ENST00000530758 CNTN6Q9UQ52 1028 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 SIK3Q9Y2K2 1263 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 DAAM1Q9Y4D1 1078 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 HCFC2Q9Y5Z7 792 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 PTPRDP23468 1912 aa17.13■□□□□ 0.33
BRK1-201ENST00000530758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.12■□□□□ 0.33
BRK1-201ENST00000530758 ACO1P21399 889 aaKnown RBP17.12■□□□□ 0.33
BRK1-201ENST00000530758 CA8P35219 290 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.33
BRK1-201ENST00000530758 RAP1GAPP47736 663 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 TFF2Q03403 129 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 UBXN1Q04323 297 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 LRMPQ12912 555 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 UVSSAQ2YD98 709 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 KLHDC7AQ5VTJ3 777 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 ARHGEF19Q8IW93 802 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 DCP1BQ8IZD4 617 aaKnown RBP17.12■□□□□ 0.33
BRK1-201ENST00000530758 VN1R2Q8NFZ6 395 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
BRK1-201ENST00000530758 KREMEN1Q96MU8 473 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 TMEM209Q96SK2 561 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 ARID3AQ99856 593 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.33
BRK1-201ENST00000530758 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 DPP7Q9UHL4 492 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 FBXW11Q9UKB1 542 aa17.12■□□□□ 0.33
BRK1-201ENST00000530758 A0A1W2PQC6 194 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 A8MXQ7 604 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 PES1O00541 588 aaKnown RBP17.11■□□□□ 0.33
BRK1-201ENST00000530758 TEX33O43247 280 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 NOL4O94818 638 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 CSPG5O95196 566 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 VNN2O95498 520 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 GLP2RO95838 553 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 GLUD1P00367 558 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 SERPINC1P01008 464 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 RFX1P22670 979 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 NDST1P52848 882 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 YWHAEP62258 255 aaKnown RBP17.11■□□□□ 0.33
BRK1-201ENST00000530758 TSPY1Q01534 308 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
BRK1-201ENST00000530758 NFE2Q16621 373 aaPredicted RBP17.11■□□□□ 0.33
BRK1-201ENST00000530758 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 RNF19BQ6ZMZ0 732 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 TCEAL8Q8IYN2 117 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 PPM1KQ8N3J5 372 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 RNF214Q8ND24 703 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 MYCBPAPQ8TBZ2 947 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 ATXN2LQ8WWM7 1075 aaKnown RBP17.11■□□□□ 0.33
BRK1-201ENST00000530758 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 ASB2Q96Q27 587 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 SYT15Q9BQS2 421 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 NAA15Q9BXJ9 866 aaKnown RBP17.11■□□□□ 0.33
BRK1-201ENST00000530758 RBSNQ9H1K0 784 aa17.11■□□□□ 0.33
BRK1-201ENST00000530758 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms