RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 CCL23P55773 120 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 PPP2CBP62714 309 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 PPP2CAP67775 309 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 TUSC3Q13454 348 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 ALX1Q15699 326 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 CCDC96Q2M329 555 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 DUSP28Q4G0W2 176 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 PAN2Q504Q3 1202 aaKnown RBP8.34□□□□□ -1.07
CHKA-205ENST00000530730 OTOP2Q7RTS6 562 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 KBTBD2Q8IY47 623 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 DNERQ8NFT8 737 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 PPM1EQ8WY54 764 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 EVI5LQ96CN4 794 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 TMEM47Q9BQJ4 181 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 SEZ6LQ9BYH1 1024 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 RANBP17Q9H2T7 1088 aaKnown RBP8.34□□□□□ -1.07
CHKA-205ENST00000530730 TMPRSS5Q9H3S3 457 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 HIPK3Q9H422 1215 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 VTA1Q9NP79 307 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 HELLSQ9NRZ9 838 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 MSRAQ9UJ68 235 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 MSRB2Q9Y3D2 182 aa8.34□□□□□ -1.07
CHKA-205ENST00000530730 TTC28Q96AY4 2481 aa8.34□□□□□ -1.08
CHKA-205ENST00000530730 MUC3AQ02505 3323 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 A0A0D9SFI3 127 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 KLHL18O94889 574 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 TOP1P11387 765 aaKnown RBP8.33□□□□□ -1.08
CHKA-205ENST00000530730 GNAT1P11488 350 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 GSPT1P15170 499 aaKnown RBP8.33□□□□□ -1.08
CHKA-205ENST00000530730 RAB30Q15771 203 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 SYDE2Q5VT97 1194 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 TRMT10BQ6PF06 316 aaKnown RBP8.33□□□□□ -1.08
CHKA-205ENST00000530730 KCNT2Q6UVM3 1135 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 LIMS2Q7Z4I7 341 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 RPUSD2Q8IZ73 545 aaKnown RBP8.33□□□□□ -1.08
CHKA-205ENST00000530730 FAM227BQ96M60 508 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 WDR11Q9BZH6 1224 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 WNT8AQ9H1J5 351 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 ALDH8A1Q9H2A2 487 aaPredicted RBP8.33□□□□□ -1.08
CHKA-205ENST00000530730 TCP11L1Q9NUJ3 509 aa8.33□□□□□ -1.08
CHKA-205ENST00000530730 ADD3Q9UEY8 706 aaKnown RBP8.33□□□□□ -1.08
CHKA-205ENST00000530730 FRMPD2Q68DX3 1309 aaPredicted RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 PTPDC1A2A3K4 754 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 FAM47E-STBD1D6RA91 191 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 MATN3O15232 486 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 HSPD1P10809 573 aaKnown RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 ALDH5A1P51649 535 aaPredicted RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 RABGGTBP53611 331 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 IFRD2Q12894 506 aaPredicted RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 MCMDC2Q4G0Z9 681 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 RRP12Q5JTH9 1297 aaKnown RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 ARHGEF18Q6ZSZ5 1173 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 CENPQQ7L2Z9 268 aaPredicted RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 IGDCC4Q8TDY8 1250 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 SCLYQ96I15 445 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 MTIF3Q9H2K0 278 aaKnown RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 SLC28A3Q9HAS3 691 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 TOMM22Q9NS69 142 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 TRMT13Q9NUP7 481 aaKnown RBP8.32□□□□□ -1.08
CHKA-205ENST00000530730 SLC4A7Q9Y6M7 1214 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 MYH4Q9Y623 1939 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 CHD7Q9P2D1 2997 aa8.32□□□□□ -1.08
CHKA-205ENST00000530730 LOC102724159A0A0B4J2E5 919 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 WNT9AO14904 365 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 KNG1P01042 644 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 SOD2P04179 222 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 MYL3P08590 195 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 SUPT20HL2P0C7V6 817 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 PDHBP11177 359 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 CYP2C9P11712 490 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 MYOGP15173 224 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 CALML3P27482 149 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 HAND2P61296 217 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 PURAQ00577 322 aaKnown RBP8.31□□□□□ -1.08
CHKA-205ENST00000530730 PWP2Q15269 919 aaKnown RBP8.31□□□□□ -1.08
CHKA-205ENST00000530730 TTC22Q5TAA0 569 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 SLC30A10Q6XR72 485 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 RNF207Q6ZRF8 634 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 ATXN2LQ8WWM7 1075 aaKnown RBP8.31□□□□□ -1.08
CHKA-205ENST00000530730 AJUBAQ96IF1 538 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 TTC14Q96N46 770 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
CHKA-205ENST00000530730 CD248Q9HCU0 757 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 KCND1Q9NSA2 647 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 DSEQ9UL01 958 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 TSC22D4Q9Y3Q8 395 aa8.31□□□□□ -1.08
CHKA-205ENST00000530730 TNKSO95271 1327 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 MCM3APO60318 1980 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 NPEPPSL1A6NEC2 478 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 NKRFO15226 690 aaKnown RBP eCLIP8.3□□□□□ -1.08
CHKA-205ENST00000530730 GPR42O15529 346 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 ENO2P09104 434 aaPredicted RBP8.3□□□□□ -1.08
CHKA-205ENST00000530730 SNHG28P0DPA3 235 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 EDNRBP24530 442 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 CPT1AP50416 773 aa8.3□□□□□ -1.08
CHKA-205ENST00000530730 RPS6P62753 249 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms