RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 SHISA7A6NL88 538 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 KIAA0391O15091 583 aaKnown RBP22.51■■□□□ 1.19
SMPD1-204ENST00000530395 SPTLC2O15270 562 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 ATF6P18850 670 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 MLLT6P55198 1093 aaPredicted RBP22.51■■□□□ 1.19
SMPD1-204ENST00000530395 FCHO2Q0JRZ9 810 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 LRRC52Q8N7C0 313 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 ATRIPQ8WXE1 791 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 RSPRY1Q96DX4 576 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 CBWD1Q9BRT8 395 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 FGFBP2Q9BYJ0 223 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 CUEDC2Q9H467 287 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 ITGA11Q9UKX5 1188 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 PCDHB5Q9Y5E4 795 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 NCANO14594 1321 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 DENND4CQ5VZ89 1909 aa22.51■■□□□ 1.19
SMPD1-204ENST00000530395 GOLGA8IPA6NC78 632 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 GOLGA8JA6NMD2 632 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 ARNTLO00327 626 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 HUS1O60921 280 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 PPP6R2O75170 966 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 PRPF6O94906 941 aaKnown RBP22.5■■□□□ 1.19
SMPD1-204ENST00000530395 HAPLN1P10915 354 aaPredicted RBP22.5■■□□□ 1.19
SMPD1-204ENST00000530395 WNT7BP56706 349 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 FZD5Q13467 585 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 PPP2R5DQ14738 602 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 NFE2Q16621 373 aaPredicted RBP22.5■■□□□ 1.19
SMPD1-204ENST00000530395 GPD1LQ8N335 351 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 C1orf127Q8N9H9 656 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 ZSWIM2Q8NEG5 633 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 MKNK1Q9BUB5 465 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 CHRDQ9H2X0 955 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 PCIF1Q9H4Z3 704 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 TASP1Q9H6P5 420 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 PRMT8Q9NR22 394 aaPredicted RBP22.5■■□□□ 1.19
SMPD1-204ENST00000530395 ZSCAN32Q9NX65 697 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 OBP2AQ9NY56 170 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 ZMYM5Q9UJ78 669 aa22.5■■□□□ 1.19
SMPD1-204ENST00000530395 R3HCC1Q9Y3T6 440 aaKnown RBP22.5■■□□□ 1.19
SMPD1-204ENST00000530395 ZNF638Q14966 1978 aaKnown RBP22.5■■□□□ 1.19
SMPD1-204ENST00000530395 KRT19P08727 400 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 TMEM191BP0C7N4 346 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 CDR1P51861 262 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 KPNA1P52294 538 aaPredicted RBP22.49■■□□□ 1.19
SMPD1-204ENST00000530395 AMPD3Q01432 767 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 BFSP1Q12934 665 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 MTAPQ13126 283 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 ARHGAP29Q52LW3 1261 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 LRRTM3Q86VH5 581 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 ZNF687Q8N1G0 1237 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 TMEM86AQ8N2M4 240 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 CSGALNACT2Q8N6G5 542 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 GIPC2Q8TF65 315 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 RUBCNQ92622 972 aa22.49■■□□□ 1.19
SMPD1-204ENST00000530395 C8orf33Q9H7E9 229 aaPredicted RBP22.49■■□□□ 1.19
SMPD1-204ENST00000530395 DCHS1Q96JQ0 3298 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 OBSL1O75147 1896 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 YEATS4O95619 227 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 CCNE1P24864 410 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 WEE1P30291 646 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 RBP5P82980 135 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 CYP4F8P98187 520 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 MYL7Q01449 175 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 PDCL2Q8N4E4 241 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 ANKRD36BP1Q96IX9 119 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 FAM126AQ9BYI3 521 aaPredicted RBP22.48■■□□□ 1.19
SMPD1-204ENST00000530395 LMAN1LQ9HAT1 526 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 PDE11AQ9HCR9 933 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 KBTBD4Q9NVX7 518 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 DDX43Q9NXZ2 648 aaKnown RBP22.48■■□□□ 1.19
SMPD1-204ENST00000530395 L1RE1Q9UN81 338 aa22.48■■□□□ 1.19
SMPD1-204ENST00000530395 CUTAO60888 179 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 LRRC32Q14392 662 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 SURF1Q15526 300 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 E2F4Q16254 413 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 GPIHBP1Q8IV16 184 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 IQUBQ8NA54 791 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 ZBTB44Q8NCP5 570 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 SPATA18Q8TC71 538 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 LEO1Q8WVC0 666 aaPredicted RBP22.47■■□□□ 1.19
SMPD1-204ENST00000530395 DHX58Q96C10 678 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 ACBD6Q9BR61 282 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 TRIM9Q9C026 710 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 MTMR12Q9C0I1 747 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 IL21Q9HBE4 155 aa22.47■■□□□ 1.19
SMPD1-204ENST00000530395 TFIP11Q9UBB9 837 aaKnown RBP22.47■■□□□ 1.19
SMPD1-204ENST00000530395 KIF26AQ9ULI4 1882 aaPredicted RBP22.46■■□□□ 1.19
SMPD1-204ENST00000530395 ZNF233A6NK53 670 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 SLC38A8A6NNN8 435 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 PRPF40AO75400 957 aaKnown RBP22.46■■□□□ 1.19
SMPD1-204ENST00000530395 PDIA4P13667 645 aaKnown RBP22.46■■□□□ 1.19
SMPD1-204ENST00000530395 ID4P47928 161 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 CCR3P51677 355 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 ASIC1P78348 528 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 PLCB2Q00722 1185 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 FOXK2Q01167 660 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 MYO1EQ12965 1108 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 TSSK4Q6SA08 328 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 MAMSTRQ6ZN01 415 aa22.46■■□□□ 1.19
SMPD1-204ENST00000530395 TOP6BLQ8N6T0 577 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms