RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 EPS8L1Q8TE68 723 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TFAP2BQ92481 460 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TMEM169Q96HH4 297 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 IGSF21Q96ID5 467 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 FAM81BQ96LP2 452 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TMEM209Q96SK2 561 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 ZSWIM1Q9BR11 485 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 C17orf80Q9BSJ5 609 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 CERS4Q9HA82 394 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 AIPL1Q9NZN9 384 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 MYO6Q9UM54 1294 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 YBX2Q9Y2T7 364 aaKnown RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 LINC01553A4QN01 128 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TMEM189-UBE2V1I3L0A0 370 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 SERPING1P05155 500 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 MMEP08473 750 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 WARSP23381 471 aaKnown RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 MEA1Q16626 185 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 KIAA0319Q5VV43 1072 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 OVOS1Q6IE37 1185 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 RAD9BQ6WBX8 426 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TOGARAM2Q6ZUX3 1019 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 METTL23Q86XA0 190 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 SLC39A11Q8N1S5 342 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 OR10T2Q8NGX3 314 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 PHOSPHO2Q8TCD6 241 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 RTP3Q9BQQ7 232 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 NT5C1AQ9BXI3 368 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 NHEJ1Q9H9Q4 299 aaPredicted RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 NOCTQ9UK39 431 aaKnown RBP11.35□□□□□ -0.59
SOX6-213ENST00000530378 PYCARDQ9ULZ3 195 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 STXBP5LQ9Y2K9 1186 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 DAAM1Q9Y4D1 1078 aa11.35□□□□□ -0.59
SOX6-213ENST00000530378 TRAPPC3O43617 180 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 TACC1O75410 805 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 CHRNB2P17787 502 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 ADORA2BP29275 332 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 ARPP19P56211 112 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 YWHAHQ04917 246 aaPredicted RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 GFPT1Q06210 699 aaPredicted RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 MDH1BQ5I0G3 518 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 CYP26C1Q6V0L0 522 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 ACRBPQ8NEB7 543 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 LNX1Q8TBB1 728 aaPredicted RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 SP7Q8TDD2 431 aaPredicted RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 SYN2Q92777 582 aaPredicted RBP11.34□□□□□ -0.59
SOX6-213ENST00000530378 TMEM176AQ96HP8 235 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 RHOBTB2Q9BYZ6 727 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 PDCL3Q9H2J4 239 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 PCDHB12Q9Y5F1 795 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 TRANK1O15050 2925 aa11.34□□□□□ -0.59
SOX6-213ENST00000530378 PTPRDP23468 1912 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 CLDN5O00501 218 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 AKR1B10O60218 316 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 FGF18O76093 207 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 HNRNPH3P31942 346 aaKnown RBP11.33□□□□□ -0.6
SOX6-213ENST00000530378 KIF11P52732 1056 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 CYP27A1Q02318 531 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 C17orf53Q8N3J3 647 aaPredicted RBP11.33□□□□□ -0.6
SOX6-213ENST00000530378 KLHL23Q8NBE8 558 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 OLIG1Q8TAK6 271 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
SOX6-213ENST00000530378 JAKMIP2Q96AA8 810 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 CCDC42Q96M95 316 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 AGPAT1Q99943 283 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 NKX2-4Q9H2Z4 354 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 ALG13Q9NP73 1137 aaKnown RBP11.33□□□□□ -0.6
SOX6-213ENST00000530378 CRTAC1Q9NQ79 661 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 ADAMTS1Q9UHI8 967 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 TFR2Q9UP52 801 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 CNTN6Q9UQ52 1028 aa11.33□□□□□ -0.6
SOX6-213ENST00000530378 A0A087X0T9 212 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 FAM228BP0C875 321 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 PRKCIP41743 596 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 FMO1Q01740 532 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 GOLGA7BQ2TAP0 167 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 CTXN3Q4LDR2 81 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 SGO2Q562F6 1265 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
SOX6-213ENST00000530378 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 RSPO2Q6UXX9 243 aaPredicted RBP11.32□□□□□ -0.6
SOX6-213ENST00000530378 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 TMEM86AQ8N2M4 240 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 B3GALNT2Q8NCR0 500 aa11.32□□□□□ -0.6
SOX6-213ENST00000530378 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms