RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 KIF26AQ9ULI4 1882 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-216ENST00000529928 TRDMT1O14717 391 aaKnown RBP17.4■□□□□ 0.38
COL16A1-216ENST00000529928 FAM189A1O60320 539 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 AVPR1AP37288 418 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 MPLP40238 635 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 SLC12A3P55017 1021 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 SMARCB1Q12824 385 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 FSTL4Q6MZW2 842 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 C2orf15Q8WU43 125 aaKnown RBP17.4■□□□□ 0.38
COL16A1-216ENST00000529928 ZCWPW1Q9H0M4 648 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 SMG9Q9H0W8 520 aaKnown RBP17.4■□□□□ 0.38
COL16A1-216ENST00000529928 VPS45Q9NRW7 570 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 TSC2P49815 1807 aa17.4■□□□□ 0.38
COL16A1-216ENST00000529928 PIGRP01833 764 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 DDX6P26196 483 aaKnown RBP eCLIP17.39■□□□□ 0.37
COL16A1-216ENST00000529928 C9orf57Q5W0N0 161 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 JADE1Q6IE81 842 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 METTL23Q86XA0 190 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 THEM5Q8N1Q8 247 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 SPPL2BQ8TCT7 592 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 EXOC4Q96A65 974 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 FAM212AQ96EL1 285 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 LSM14BQ9BX40 385 aaKnown RBP17.39■□□□□ 0.37
COL16A1-216ENST00000529928 KIF9Q9HAQ2 790 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 HPS4Q9NQG7 708 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.39■□□□□ 0.37
COL16A1-216ENST00000529928 ODF2LQ9ULJ1 636 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 DERAQ9Y315 318 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 SPAG17Q6Q759 2223 aa17.39■□□□□ 0.37
COL16A1-216ENST00000529928 CNOT1A5YKK6 2376 aaKnown RBP17.38■□□□□ 0.37
COL16A1-216ENST00000529928 CFAP47Q6ZTR5 3102 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 ANO9A1A5B4 782 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 PIRO00625 290 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 RNF40O75150 1001 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 KCNK5O95279 499 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 PLA2G4BP0C869 781 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 BFSP1Q12934 665 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 TMEM132DQ14C87 1099 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 RNF43Q68DV7 783 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 MAB21L3Q8N8X9 362 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 GIPC2Q8TF65 315 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 PNMA5Q96PV4 448 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 MSTO1Q9BUK6 570 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 EBF3Q9H4W6 596 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 TDP1Q9NUW8 608 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 CPSF3Q9UKF6 684 aaKnown RBP17.38■□□□□ 0.37
COL16A1-216ENST00000529928 TBX20Q9UMR3 447 aa17.38■□□□□ 0.37
COL16A1-216ENST00000529928 A0A0B4J269 797 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 NPHP3-ACAD11A0A0J9YXS1 232 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 OTOL1A6NHN0 477 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-216ENST00000529928 SOBPA7XYQ1 873 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 NFICP08651 508 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 DRD1P21728 446 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 NLRP12P59046 1061 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 ATP2C1P98194 919 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-216ENST00000529928 KARSQ15046 597 aaKnown RBP17.37■□□□□ 0.37
COL16A1-216ENST00000529928 ELF2Q15723 593 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 PLK5Q496M5 336 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 FBXO43Q4G163 708 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 TRIM68Q6AZZ1 485 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 CC2D1AQ6P1N0 951 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-216ENST00000529928 USP13Q92995 863 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-216ENST00000529928 CHFRQ96EP1 664 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-216ENST00000529928 PLIN2Q99541 437 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 KIF2CQ99661 725 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 SMOC1Q9H4F8 434 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 CCL26Q9Y258 94 aa17.37■□□□□ 0.37
COL16A1-216ENST00000529928 K7ENM7 598 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 CYB561D2O14569 222 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 EGFP01133 1207 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 HAPLN1P10915 354 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-216ENST00000529928 NMT1P30419 496 aaKnown RBP17.36■□□□□ 0.37
COL16A1-216ENST00000529928 ABCD1P33897 745 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 CDR1P51861 262 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 ARSHQ5FYA8 562 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 TMEM150AQ86TG1 271 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 P2RY13Q9BPV8 354 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 REEP2Q9BRK0 252 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 PYM1Q9BRP8 204 aaKnown RBP17.36■□□□□ 0.37
COL16A1-216ENST00000529928 ASB7Q9H672 318 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 SH2B1Q9NRF2 756 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-216ENST00000529928 ABI2Q9NYB9 513 aaPredicted RBP17.36■□□□□ 0.37
COL16A1-216ENST00000529928 C2CD2Q9Y426 696 aa17.36■□□□□ 0.37
COL16A1-216ENST00000529928 SDK1Q7Z5N4 2213 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 RHOBTB1O94844 696 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 F11P03951 625 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 TAF6P49848 677 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 PDGFRLQ15198 375 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 TMEM119Q4V9L6 283 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 RILPL1Q5EBL4 403 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 PSAPL1Q6NUJ1 521 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 SYT13Q7L8C5 426 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 LRRTM3Q86VH5 581 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 DCP1BQ8IZD4 617 aaKnown RBP17.35■□□□□ 0.37
COL16A1-216ENST00000529928 MYCT1Q8N699 235 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 MRPS31Q92665 395 aaKnown RBP17.35■□□□□ 0.37
COL16A1-216ENST00000529928 HHIPQ96QV1 700 aa17.35■□□□□ 0.37
COL16A1-216ENST00000529928 EDEM2Q9BV94 578 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms