RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 SLC34A1Q06495 639 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 WDR72Q3MJ13 1102 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 RINLQ6ZS11 566 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 ANO5Q75V66 913 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 PASD1Q8IV76 773 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 GLIS1Q8NBF1 620 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 SHC3Q92529 594 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 ZNF75CPQ92670 426 aaPredicted RBP14.97□□□□□ -0.01
USP48-213ENST00000529637 FNBP1Q96RU3 617 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 GMLQ99445 158 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 PLVAPQ9BX97 442 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 TMEM8AQ9HCN3 771 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 C1orf112Q9NSG2 853 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 RNF146Q9NTX7 359 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 USTQ9Y2C2 406 aa14.97□□□□□ -0.01
USP48-213ENST00000529637 PSMG1O95456 288 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 SPATA31D3P0C874 917 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 MAGEA4P43358 317 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 KRT76Q01546 638 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 SPATA31D4Q6ZUB0 917 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 BSNDQ8WZ55 320 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 ATG4CQ96DT6 458 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 TRAPPC9Q96Q05 1148 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 DCLK3Q9C098 648 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 GTF3C4Q9UKN8 822 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 ACTL7BQ9Y614 415 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 A0A0G2JND7 137 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 AMPD1P23109 780 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 PIK3CAP42336 1068 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 STAT4Q14765 748 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 MTERF2Q49AM1 385 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 IZUMO3Q5VZ72 239 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 MAK16Q9BXY0 300 aaKnown RBP14.96□□□□□ -0.01
USP48-213ENST00000529637 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 STK32BQ9NY57 414 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
USP48-213ENST00000529637 PCDHA10Q9Y5I2 948 aa14.96□□□□□ -0.01
USP48-213ENST00000529637 BRWD3Q6RI45 1802 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 CXCL9Q07325 125 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 SLC45A4Q5BKX6 768 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 LVRNQ6Q4G3 990 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 NIPA1Q7RTP0 329 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 FAM83AQ86UY5 434 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 APLFQ8IW19 511 aaPredicted RBP14.96□□□□□ -0.02
USP48-213ENST00000529637 C12orf56Q8IXR9 622 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 FAM81AQ8TBF8 368 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 BTBD10Q9BSF8 475 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 PXMP2Q9NR77 195 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 LNPEPQ9UIQ6 1025 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 ZNRF3Q9ULT6 936 aa14.96□□□□□ -0.02
USP48-213ENST00000529637 UTRNP46939 3433 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 C2CD2LO14523 706 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 LMNAP02545 664 aaKnown RBP14.95□□□□□ -0.02
USP48-213ENST00000529637 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 ADRA1DP25100 572 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 RXRBP28702 533 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 LIG4P49917 911 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
USP48-213ENST00000529637 MCL1Q07820 350 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 TTC7BQ86TV6 843 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 HELQQ8TDG4 1101 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 WNK4Q96J92 1243 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 CCDC77Q9BR77 488 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 TIPINQ9BVW5 301 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 SAYSD1Q9NPB0 183 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 NEU2Q9Y3R4 380 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 MAGEA13PA6NCF6 341 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 TBC1D12O60347 775 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 BANF1O75531 89 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 SFNP31947 248 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 CPA2P48052 419 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 ACOT2P49753 483 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 NCKAP1LP55160 1127 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 THOC5Q13769 683 aaKnown RBP14.95□□□□□ -0.02
USP48-213ENST00000529637 TCEAL1Q15170 157 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 CNPY1Q3B7I2 92 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 WDR44Q5JSH3 913 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 ANKS1BQ7Z6G8 1248 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 LPAR1Q92633 364 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 GBP5Q96PP8 586 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 TUBGCP5Q96RT8 1024 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 NDNQ99608 321 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 HEY2Q9UBP5 337 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP48-213ENST00000529637 RIPK3Q9Y572 518 aa14.95□□□□□ -0.02
USP48-213ENST00000529637 GYG2O15488 501 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 MTA2O94776 668 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 NR3C2P08235 984 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 ZSCAN5DPP0CG00 497 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 RASIP1Q5U651 963 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 HHATQ5VTY9 493 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 SPOPLQ6IQ16 392 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 MAP4K3Q8IVH8 894 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 PTPRN2Q92932 1015 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 PTCD3Q96EY7 689 aaKnown RBP14.94□□□□□ -0.02
USP48-213ENST00000529637 MYOZ2Q9NPC6 264 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 TAS2R1Q9NYW7 299 aa14.94□□□□□ -0.02
USP48-213ENST00000529637 UVRAGQ9P2Y5 699 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms