RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 DUSP2Q05923 314 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 TMEM62Q0P6H9 643 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 SCAPQ12770 1279 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 RTP5Q14D33 572 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 NPY5RQ15761 445 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 SLC5A9Q2M3M2 681 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 AMOTQ4VCS5 1084 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 FAM47AQ5JRC9 791 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 SLC9C2Q5TAH2 1124 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 AFMIDQ63HM1 303 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 TRIM68Q6AZZ1 485 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 PLAG1Q6DJT9 500 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 ZNF574Q6ZN55 896 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 ANKS1BQ7Z6G8 1248 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 FRMD5Q7Z6J6 570 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 CCDC28AQ8IWP9 274 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 NKAIN3Q8N8D7 197 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 PLA2G15Q8NCC3 412 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 CSGALNACT1Q8TDX6 532 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 DDX17Q92841 729 aaKnown RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 ZUFSPQ96AP4 578 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 TRAPPC9Q96Q05 1148 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 MYOCQ99972 504 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 CPEB1Q9BZB8 566 aaKnown RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 MS4A7Q9GZW8 240 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 KATNBL1Q9H079 304 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 ALDH8A1Q9H2A2 487 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 CCDC68Q9H2F9 335 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 GPR35Q9HC97 309 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 XPNPEP3Q9NQH7 507 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 JKAMPQ9P055 326 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 ORC3Q9UBD5 711 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 DKK4Q9UBT3 224 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 SLC23A1Q9UHI7 598 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 ARHGAP26Q9UNA1 814 aa4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 RSF1Q96T23 1441 aaPredicted RBP4.03□□□□□ -1.76
AMBRA1-208ENST00000529558 TDRD9Q8NDG6 1382 aaKnown RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 TCRBV7S2A1N4TA0A589 114 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 PI4KAP2A4QPH2 592 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 C2orf78A6NCI8 922 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 H0Y3Z8 333 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 RAB27BO00194 218 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 DOK2O60496 412 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 COQ9O75208 318 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 MED26O95402 600 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 KNG1P01042 644 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 RPN1P04843 607 aaKnown RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 MYCLP12524 364 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 PECAM1P16284 738 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 RXRAP19793 462 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 ATICP31939 592 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 GALNSP34059 522 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 KRT20P35900 424 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 CPT1AP50416 773 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 YBX1P67809 324 aaKnown RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 NSUN2Q08J23 767 aaKnown RBP eCLIP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 ARHGEF7Q14155 803 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 VWA3BQ502W6 1294 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 ADGRF1Q5T601 910 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 ATPAF1Q5TC12 328 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 FCRL6Q6DN72 434 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 CCDC129Q6ZRS4 1044 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 SEM1Q6ZVN7 128 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 USP37Q86T82 979 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 TMEM57Q8N5G2 664 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 NLGN4YQ8NFZ3 816 aaPredicted RBP4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 MDM1Q8TC05 714 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 CLIC6Q96NY7 704 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 SYT3Q9BQG1 590 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 PACSIN1Q9BY11 444 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 GPR63Q9BZJ6 419 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 RNF32Q9H0A6 362 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 GHITMQ9H3K2 345 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 RNPEPQ9H4A4 650 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 PRDM13Q9H4Q3 707 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 ZBTB26Q9HCK0 441 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 PCDH18Q9HCL0 1135 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 PI4KBQ9UBF8 816 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 XPR1Q9UBH6 696 aa4.02□□□□□ -1.77
AMBRA1-208ENST00000529558 LOC102723971A0A1B0GUV8 181 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 OR2W5A6NFC9 320 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 ABLIM1O14639 778 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 PCDH17O14917 1159 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 CCP110O43303 1012 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 WIPF1O43516 503 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 AHCYL1O43865 530 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 TGFB1P01137 390 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 PRNPP04156 253 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 ANXA6P08133 673 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 HNRNPA1P09651 372 aaKnown RBP eCLIP4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 RAP2AP10114 183 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 CYP2C8P10632 490 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 XRCC6P12956 609 aaKnown RBP eCLIP4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 TPH1P17752 444 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 ALOX12P18054 663 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 FBLN1P23142 703 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 SLC6A4P31645 630 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 NPTX2P47972 431 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 POLD2P49005 469 aa4.01□□□□□ -1.77
AMBRA1-208ENST00000529558 KCNQ1P51787 676 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms