RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 ERBB2P04626 1255 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 MYL3P08590 195 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 BRAFP15056 766 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 EN2P19622 333 aaPredicted RBP5.79□□□□□ -1.48
CTR9-204ENST00000529355 ANXA11P50995 505 aaKnown RBP5.79□□□□□ -1.48
CTR9-204ENST00000529355 PIGFQ07326 219 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 CNGA2Q16280 664 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 SPDYE7PQ495Y7 208 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 MAP9Q49MG5 647 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 VPS53Q5VIR6 699 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 FAM160B1Q5W0V3 765 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 ZDHHC24Q6UX98 284 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 CLNKQ7Z7G1 428 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 MICU3Q86XE3 530 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 KBTBD7Q8WVZ9 684 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 LPIN2Q92539 896 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 APIPQ96GX9 242 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 Q96MF0 132 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 DPH1Q9BZG8 443 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 COL20A1Q9P218 1284 aa5.79□□□□□ -1.48
CTR9-204ENST00000529355 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PIPSLA2A3N6 862 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 hCG_1984214I3L0E3 225 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PMM2O15305 246 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 CHEK2O96017 543 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 HLA-DOAP06340 250 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PDHA1P08559 390 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 TRIM27P14373 513 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 MAKP20794 623 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 ACVRL1P37023 503 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PLA2G5P39877 138 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PIK3CBP42338 1070 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 GCLCP48506 637 aaPredicted RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 CACNB3P54284 484 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 LILRA4P59901 499 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 FAM193AP78312 1265 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 SLC13A2Q13183 592 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 SF3B3Q15393 1217 aaKnown RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 ZIK1Q3SY52 487 aaPredicted RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 LY6G5CQ5SRR4 150 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 FAM9AQ8IZU1 332 aaPredicted RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 MPP5Q8N3R9 675 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 BEND2Q8NDZ0 799 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 OR56A3Q8NH54 315 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 SSH3Q8TE77 659 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PARD3BQ8TEW8 1205 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 RAPGEF4Q8WZA2 1011 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 PTCD3Q96EY7 689 aaKnown RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 SPATA5L1Q9BVQ7 753 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 NAA15Q9BXJ9 866 aaKnown RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 WDR26Q9H7D7 661 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 MRPS17Q9Y2R5 130 aaKnown RBP5.78□□□□□ -1.48
CTR9-204ENST00000529355 PLEKHM1Q9Y4G2 1056 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 RAD54BQ9Y620 910 aa5.78□□□□□ -1.48
CTR9-204ENST00000529355 A0A087WWL8 130 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 GRID2IPA4D2P6 1211 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 MYADML2A6NDP7 307 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 VWC2LB2RUY7 222 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 F5H697 171 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 PPP3CBP16298 524 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 ZKSCAN1P17029 563 aaPredicted RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 NPTX2P47972 431 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 RPS7P62081 194 aaKnown RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 RPS16P62249 146 aaKnown RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 FOXI1Q12951 378 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 POLD3Q15054 466 aaPredicted RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 DCAF12L1Q5VU92 463 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 IL31Q6EBC2 164 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 TMEM108Q6UXF1 575 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 ZNF783Q6ZMS7 281 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 CCAR1Q8IX12 1150 aaKnown RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 SLC16A11Q8NCK7 471 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 OR6B3Q8NGW1 331 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 FUBP1Q96AE4 644 aaKnown RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 ARNT2Q9HBZ2 717 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 TESQ9UGI8 421 aaKnown RBP5.77□□□□□ -1.49
CTR9-204ENST00000529355 CORO2BQ9UQ03 480 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 TMX2Q9Y320 296 aa5.77□□□□□ -1.49
CTR9-204ENST00000529355 TRGV11A0A075B6L2 103 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 FRS3O43559 492 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 TBC1D4O60343 1298 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 SLPIP03973 132 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 NDUFV1P49821 464 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 NEK3P51956 506 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 PTPAQ15257 358 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 LONRF3Q496Y0 759 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 PREPLQ4J6C6 727 aaPredicted RBP5.76□□□□□ -1.49
CTR9-204ENST00000529355 RBM20Q5T481 1227 aaKnown RBP5.76□□□□□ -1.49
CTR9-204ENST00000529355 SP5Q6BEB4 398 aaPredicted RBP5.76□□□□□ -1.49
CTR9-204ENST00000529355 Q6YL49 198 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 SLC44A3Q8N4M1 653 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 PJA1Q8NG27 643 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 SNX19Q92543 992 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 DDX17Q92841 729 aaKnown RBP5.76□□□□□ -1.49
CTR9-204ENST00000529355 TBCBQ99426 244 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 AMBRA1Q9C0C7 1298 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 KIAA1586Q9HCI6 787 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 SERHLQ9NQF3 203 aa5.76□□□□□ -1.49
CTR9-204ENST00000529355 GEMIN8Q9NWZ8 242 aaKnown RBP5.76□□□□□ -1.49
CTR9-204ENST00000529355 SYBUQ9NX95 663 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms