RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 SLC38A7Q9NVC3 462 aa8.4□□□□□ -1.07
C11orf88-203ENST00000529167 GIN1Q9NXP7 522 aa8.4□□□□□ -1.07
C11orf88-203ENST00000529167 KLHL3Q9UH77 587 aa8.4□□□□□ -1.07
C11orf88-203ENST00000529167 KCNJ14Q9UNX9 436 aa8.4□□□□□ -1.07
C11orf88-203ENST00000529167 PTPN22Q9Y2R2 807 aa8.4□□□□□ -1.07
C11orf88-203ENST00000529167 ATAD5Q96QE3 1844 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 ARHGAP33O14559 1287 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 PEX1O43933 1283 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 DKC1O60832 514 aaKnown RBP eCLIP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 CLASP2O75122 1294 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 COL6A1P12109 1028 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 ATICP31939 592 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 GSSP48637 474 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 GPC3P51654 580 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 HSD17B4P51659 736 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 WDR4P57081 412 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 ZNF280AP59817 542 aaPredicted RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 WASHC5Q12768 1159 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RASGRF1Q13972 1273 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 CYTH1Q15438 398 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 CLUL1Q15846 466 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 PCSK7Q16549 785 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 SUSD4Q5VX71 490 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 PPP2R2DQ66LE6 453 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 ANKRD40Q6AI12 368 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 LRRC6Q86X45 466 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RHOT2Q8IXI1 618 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 KCNK9Q9NPC2 374 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 FAM207AQ9NSI2 230 aaPredicted RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 NKIRAS1Q9NYS0 192 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 GGA3Q9NZ52 723 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MTRF1LQ9UGC7 380 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MTUS1Q9ULD2 1270 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RTL9Q8NET4 1388 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MYH11P35749 1972 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 C15orf38-AP3S2A0A0A6YYH1 394 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 STAM2O75886 525 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 OCM2P0CE71 109 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 OCMP0CE72 109 aaPredicted RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RRM1P23921 792 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 SERPINB6P35237 376 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 NPEPPSP55786 919 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 TFCP2Q12800 502 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MAPK7Q13164 816 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RRP1BQ14684 758 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 KYNUQ16719 465 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 CCDC14Q49A88 953 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 SFT2D3Q587I9 215 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RAPH1Q70E73 1250 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 ARPINQ7Z6K5 226 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MTDHQ86UE4 582 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 CPSF7Q8N684 471 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 LINC00469Q8N7U9 141 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 OR7G1Q8NGA0 311 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 DENND1AQ8TEH3 1009 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 GPATCH1Q9BRR8 931 aaKnown RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 R3HDMLQ9H3Y0 253 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 RRN3Q9NYV6 651 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 CRNNQ9UBG3 495 aaPredicted RBP8.39□□□□□ -1.07
C11orf88-203ENST00000529167 LZTS1Q9Y250 596 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 MAP3K2Q9Y2U5 619 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 FRMPD4Q14CM0 1322 aa8.39□□□□□ -1.07
C11orf88-203ENST00000529167 A0A087X0T9 212 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 PODXLO00592 558 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 ZNF213O14771 459 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 NKRFO15226 690 aaKnown RBP eCLIP8.38□□□□□ -1.07
C11orf88-203ENST00000529167 B4GALT4O60513 344 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 CSDE1O75534 798 aaKnown RBP8.38□□□□□ -1.07
C11orf88-203ENST00000529167 MTA2O94776 668 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 DEXIO95424 95 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 LDHBP07195 334 aaKnown RBP8.38□□□□□ -1.07
C11orf88-203ENST00000529167 FAM228BP0C875 321 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 CDH3P22223 829 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 PTGIRP43119 386 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 EIF2B2P49770 351 aaKnown RBP8.38□□□□□ -1.07
C11orf88-203ENST00000529167 ENTPD1P49961 510 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 CDK9P50750 372 aaKnown RBP8.38□□□□□ -1.07
C11orf88-203ENST00000529167 NR1H2P55055 460 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 NUP107P57740 925 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 DLG1Q12959 904 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 NONOQ15233 471 aaKnown RBP eCLIP8.38□□□□□ -1.07
C11orf88-203ENST00000529167 PDK4Q16654 411 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 SIGIRRQ6IA17 410 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 TTC23LQ6PF05 361 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 JAMLQ86YT9 394 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 AHI1Q8N157 1196 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 PPP4R1Q8TF05 950 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 ART4Q93070 314 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 MED30Q96HR3 178 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 CEP44Q9C0F1 390 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 PARVGQ9HBI0 331 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 MLXIPLQ9NP71 852 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 TBC1D23Q9NUY8 699 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 GID8Q9NWU2 228 aa8.38□□□□□ -1.07
C11orf88-203ENST00000529167 CEP72Q9P209 647 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms