RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CCSER1Q9C0I3 900 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 NXF3Q9H4D5 531 aaKnown RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 PDZD7Q9H5P4 517 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 C17orf75Q9HAS0 396 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 KANSL3Q9P2N6 904 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 GIT1Q9Y2X7 761 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 SRPRBQ9Y5M8 271 aaKnown RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 MORC2Q9Y6X9 1032 aaPredicted RBP9.27□□□□□ -0.93
SSBP3-212ENST00000528930 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
SSBP3-212ENST00000528930 THADAQ6YHU6 1953 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 NPHP3-ACAD11A0A0J9YXS1 232 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 K7ERI5 159 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CDX4O14627 284 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 N4BP3O15049 544 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 RFPL2O75678 378 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 SSBP05455 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CNPP09543 421 aaKnown RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 PLCG1P19174 1290 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 MLH1P40692 756 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 GRM5P41594 1212 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CCR10P46092 362 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 NASPP49321 788 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 SCNN1GP51170 649 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 EFNA5P52803 228 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CEBPZQ03701 1054 aaKnown RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 RNASELQ05823 741 aaKnown RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 DSC1Q08554 894 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 RAD51AP2Q09MP3 1159 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 SLC39A14Q15043 492 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 KARSQ15046 597 aaKnown RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 DESI1Q6ICB0 168 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 LYPD8Q6UX82 237 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CACNA2D4Q7Z3S7 1137 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 KBTBD6Q86V97 674 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 COLGALT2Q8IYK4 626 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 SPEM1Q8N4L4 309 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CHCHD4Q8N4Q1 142 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 ZNF513Q8N8E2 541 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 MDM1Q8TC05 714 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 URGCPQ8TCY9 931 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 GAB3Q8WWW8 586 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 RAD54LQ92698 747 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CALML4Q96GE6 196 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 IGSF21Q96ID5 467 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CDK5RAP3Q96JB5 506 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 ZC3H10Q96K80 434 aaKnown RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 TMEM175Q9BSA9 504 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 APOL6Q9BWW8 343 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 TRIM6Q9C030 488 aaPredicted RBP9.26□□□□□ -0.93
SSBP3-212ENST00000528930 GBP3Q9H0R5 595 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CXCL16Q9H2A7 254 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 PTPRHQ9HD43 1115 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 TMEM9BQ9NQ34 198 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 SNTG2Q9NY99 539 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 KCND2Q9NZV8 630 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 ARHGAP28Q9P2N2 729 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 CREBBPQ92793 2442 aa9.26□□□□□ -0.93
SSBP3-212ENST00000528930 MYH11P35749 1972 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 COL12A1Q99715 3063 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 SPAARA0A1B0GVQ0 90 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 CCDC169A6NNP5 214 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 ABLIM1O14639 778 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 NRP1O14786 923 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 WISP1O95388 367 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 EFEMP2O95967 443 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 ALDH2P05091 517 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 PLS3P13797 630 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 LIG1P18858 919 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 KLRC2P26717 231 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 DDIT3P35638 169 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 RIPPLY3P57055 190 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 DMP1Q13316 513 aaPredicted RBP9.25□□□□□ -0.93
SSBP3-212ENST00000528930 PKP1Q13835 747 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 MCM6Q14566 821 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 ATF7IP2Q5U623 682 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 HEATR6Q6AI08 1181 aaKnown RBP9.25□□□□□ -0.93
SSBP3-212ENST00000528930 LINC00301Q8NCQ3 95 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 TMEM161BQ8NDZ6 487 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 DNASE1L2Q92874 299 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 KCNN1Q92952 543 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 ACO2Q99798 780 aaKnown RBP9.25□□□□□ -0.93
SSBP3-212ENST00000528930 EMILIN2Q9BXX0 1053 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 HEBP1Q9NRV9 189 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 MARCH5Q9NX47 278 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 KLK14Q9P0G3 267 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
SSBP3-212ENST00000528930 PARP2Q9UGN5 583 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 CDH7Q9ULB5 785 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 NDRG2Q9UN36 371 aaKnown RBP9.25□□□□□ -0.93
SSBP3-212ENST00000528930 TNFSF13BQ9Y275 285 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 FAN1Q9Y2M0 1017 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 PHLPP2Q6ZVD8 1323 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
SSBP3-212ENST00000528930 TDRD15B5MCY1 1934 aaKnown RBP9.25□□□□□ -0.93
SSBP3-212ENST00000528930 ZMYM2Q9UBW7 1377 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 CARNS1A5YM72 827 aa9.24□□□□□ -0.93
SSBP3-212ENST00000528930 MAN2B1O00754 1011 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms