RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NT5C1B-RDH14C9J2C7 533 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 CILPO75339 1184 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 GFPT2O94808 682 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 EFEMP2O95967 443 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 GLUD1P00367 558 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 DESP17661 470 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SLC9A1P19634 815 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 KLRC2P26717 231 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 TKTP29401 623 aaKnown RBP8.44□□□□□ -1.06
SSBP3-211ENST00000528787 KRT9P35527 623 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SOX5P35711 763 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 USP8P40818 1118 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 BRCC3P46736 316 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF75DP51815 510 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 GUCY2FP51841 1108 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 WNT7BP56706 349 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 LRMPQ12912 555 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 GPR17Q13304 367 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 RAB33AQ14088 237 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 VEPH1Q14D04 833 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 PTPN14Q15678 1187 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 CFAP221Q4G0U5 840 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SGO2Q562F6 1265 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SFMBT2Q5VUG0 894 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 KIAA0319Q5VV43 1072 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 WSCD1Q658N2 575 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 TMEM270Q6UE05 265 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 ITIH5Q86UX2 942 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 LEMD2Q8NC56 503 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 B3GALNT2Q8NCR0 500 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 OR8K1Q8NGG5 319 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 MYCBPAPQ8TBZ2 947 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SHC3Q92529 594 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 CASP10Q92851 521 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SEMA4DQ92854 862 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SMARCD1Q96GM5 515 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 HEXIM2Q96MH2 286 aaKnown RBP8.44□□□□□ -1.06
SSBP3-211ENST00000528787 SYT15Q9BQS2 421 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 PAAF1Q9BRP4 392 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 PI4K2AQ9BTU6 479 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 NAA15Q9BXJ9 866 aaKnown RBP8.44□□□□□ -1.06
SSBP3-211ENST00000528787 ZNF518BQ9C0D4 1074 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 TLE6Q9H808 572 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 COMMD8Q9NX08 183 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 AFF4Q9UHB7 1163 aaKnown RBP8.44□□□□□ -1.06
SSBP3-211ENST00000528787 ZMYM5Q9UJ78 669 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 MTUS1Q9ULD2 1270 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 CAPN11Q9UMQ6 739 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 L1RE1Q9UN81 338 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 ASB3Q9Y575 518 aa8.44□□□□□ -1.06
SSBP3-211ENST00000528787 TSC2P49815 1807 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 VWA8A3KMH1 1905 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 AKR1B15C9JRZ8 316 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 F8VZ95 297 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 FSCN2O14926 492 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 SPTLC1O15269 473 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 SART1O43290 800 aaKnown RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 XYLBO75191 536 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 LSM8O95777 96 aaKnown RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 HNRNPA1P09651 372 aaKnown RBP eCLIP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 WEE2P0C1S8 567 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 LINC00271P0C7V0 271 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 SETSIPP0DME0 302 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 MYOGP15173 224 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 ATF2P15336 505 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 CD19P15391 556 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 PTPN1P18031 435 aaKnown RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 CD58P19256 250 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 GNA15P30679 374 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 HOXA9P31269 272 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 PBX2P40425 430 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 MAGEA11P43364 429 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 ALDH1A3P47895 512 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 PPP3CCP48454 512 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 KCNMA1Q12791 1236 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 DRAP1Q14919 205 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 TAF12Q16514 161 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 ASIC2Q16515 512 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 ARHGAP44Q17R89 818 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 PHLDB3Q6NSJ2 640 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 SCARA5Q6ZMJ2 495 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 RRAGAQ7L523 313 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 GAS2L3Q86XJ1 694 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 FAM71AQ8IYT1 594 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 RBBP8NLQ8NC74 664 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 CCDC112Q8NEF3 446 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 LNX1Q8TBB1 728 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 NAP1L5Q96NT1 182 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 MED10Q9BTT4 135 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 UBXN6Q9BZV1 441 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 ZCWPW1Q9H0M4 648 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 DEF6Q9H4E7 631 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 ALG13Q9NP73 1137 aaKnown RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 PNPLA8Q9NP80 782 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 CYLDQ9NQC7 956 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 UXTQ9UBK9 157 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-211ENST00000528787 CDY1Q9Y6F8 540 aa8.43□□□□□ -1.06
SSBP3-211ENST00000528787 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
SSBP3-211ENST00000528787 PRRG1O14668 218 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms