RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 RBP5P82980 135 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 MMS22LQ6ZRQ5 1243 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 RNF180Q86T96 592 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 NT5DC3Q86UY8 548 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 GPR161Q8N6U8 529 aaKnown RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 IQCGQ9H095 443 aaKnown RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 SDCBP2Q9H190 292 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 TRMT13Q9NUP7 481 aaKnown RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 GTF3C4Q9UKN8 822 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ITGA11Q9UKX5 1188 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 TRPV2Q9Y5S1 764 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 GHRP10912 638 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 UNGP13051 313 aaPredicted RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 P4HA1P13674 534 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 PRLRP16471 622 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 AXLP30530 894 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ZNF132P52740 706 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 YWHAEP62258 255 aaKnown RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 ITGA7Q13683 1181 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 PCBP1Q15365 356 aaKnown RBP eCLIP8.18□□□□□ -1.1
SOX6-211ENST00000528429 CFAP221Q4G0U5 840 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 SERINC5Q86VE9 423 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 CPNE8Q86YQ8 564 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 C10orf67Q8IYJ2 551 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 MCOLN2Q8IZK6 566 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 PCSK9Q8NBP7 692 aaKnown RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 RNF169Q8NCN4 708 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 BEST2Q8NFU1 509 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ZNF296Q8WUU4 475 aaPredicted RBP8.18□□□□□ -1.1
SOX6-211ENST00000528429 TFAP2BQ92481 460 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 PARD6BQ9BYG5 372 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 GOLGA2P5Q9HBQ8 144 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ADAM22Q9P0K1 906 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ANAPC7Q9UJX3 599 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ST3GAL5Q9UNP4 418 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 CNTN6Q9UQ52 1028 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 IPPQ9Y573 584 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 SNX9Q9Y5X1 595 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ALG6Q9Y672 507 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 GRIN2DO15399 1336 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 ATP8B3O60423 1300 aa8.18□□□□□ -1.1
SOX6-211ENST00000528429 TRIM64CA6NLI5 447 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 SPOPO43791 374 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 CHRNA1P02708 482 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 IL4RP24394 825 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 NOMO3P69849 1222 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 MYO1EQ12965 1108 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 UBXN11Q5T124 520 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 TMEM110Q86TL2 294 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 CD302Q8IX05 232 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.17□□□□□ -1.1
SOX6-211ENST00000528429 UBR7Q8N806 425 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 KLHDC9Q8NEP7 349 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 SPATA4Q8NEY3 305 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ZFP42Q96MM3 310 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 TWNKQ96RR1 684 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ZSWIM1Q9BR11 485 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 OSBPL7Q9BZF2 842 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 TRIM7Q9C029 511 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 PLEKHA4Q9H4M7 779 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 PLEKHA5Q9HAU0 1116 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 SMIM28A0A1B0GU29 152 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 MEIS3P2A8K0S8 358 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 FKTNO75072 461 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ZMYND10O75800 440 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 GJB6O95452 261 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 CYP1A1P04798 512 aaPredicted RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 COMTP21964 271 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ATICP31939 592 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ACLYP53396 1101 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 IRX1P78414 480 aaPredicted RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 CENPCQ03188 943 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ZNF211Q13398 564 aaPredicted RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 MAP3K21Q5TCX8 1036 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 LIN9Q5TKA1 542 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ZCCHC8Q6NZY4 707 aaKnown RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 SLFN11Q7Z7L1 901 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ARRDC4Q8NCT1 418 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 CCDC26Q8TAB7 109 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 GLT1D1Q96MS3 346 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ANKZF1Q9H8Y5 726 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 ARGLU1Q9NWB6 273 aaPredicted RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 FAM53CQ9NYF3 392 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 G3BP2Q9UN86 482 aaKnown RBP8.17□□□□□ -1.1
SOX6-211ENST00000528429 TRIM17Q9Y577 477 aa8.17□□□□□ -1.1
SOX6-211ENST00000528429 DYTNA2CJ06 578 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 TRIM66O15016 1216 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CYP1A2P05177 515 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CD52P31358 61 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 STIP1P31948 543 aaKnown RBP8.16□□□□□ -1.1
SOX6-211ENST00000528429 GRK4P32298 578 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 MARCKSL1P49006 195 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 CLCN6P51797 869 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 RAD23BP54727 409 aa8.16□□□□□ -1.1
SOX6-211ENST00000528429 HHATQ5VTY9 493 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms