RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 IL18RAPO95256 599 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 GAP43P17677 238 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 SATB1Q01826 763 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 TNK2Q07912 1038 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 SLC39A14Q15043 492 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 SDHAF4Q5VUM1 108 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 PDILTQ8N807 584 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 CBWD1Q9BRT8 395 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 TASP1Q9H6P5 420 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 C2orf42Q9NWW7 574 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 ABI2Q9NYB9 513 aaPredicted RBP16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 NCDNQ9UBB6 729 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 HSFX1Q9UBD0 423 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 SEL1LQ9UBV2 794 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 EXOC7Q9UPT5 735 aa16.75■□□□□ 0.27
CLNS1A-210ENST00000528364 ITGB3P05106 788 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 STAT6P42226 847 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 FOXK2Q01167 660 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 POU5F1Q01860 360 aaKnown RBP16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 DMWDQ09019 674 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 TAF12Q16514 161 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 LPAL2Q16609 132 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 ARHGAP15Q53QZ3 475 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 MAMSTRQ6ZN01 415 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 ERMP1Q7Z2K6 904 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 TMEM150AQ86TG1 271 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 BRSK2Q8IWQ3 736 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 SYCP3Q8IZU3 236 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 C1orf127Q8N9H9 656 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 GLIS3Q8NEA6 775 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 CXorf38Q8TB03 319 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 PDE11AQ9HCR9 933 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 PANK4Q9NVE7 773 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 SMG5Q9UPR3 1016 aaKnown RBP16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 SDK1Q7Z5N4 2213 aa16.74■□□□□ 0.27
CLNS1A-210ENST00000528364 CACNA1AO00555 2505 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 ATG2BQ96BY7 2078 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 SPECC1L-ADORA2AF8WAN1 911 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 HCRTO43612 131 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 FGF19O95750 216 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 HMGA1P17096 107 aaKnown RBP16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 ACAT1P24752 427 aaKnown RBP16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 TXLNAP40222 546 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 CXCL12P48061 93 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 VEPH1Q14D04 833 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 PON2Q15165 354 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 CCDC142Q17RM4 750 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 SV2CQ496J9 727 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 Q6ZS52 159 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 OSTM1Q86WC4 334 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 DCP1BQ8IZD4 617 aaKnown RBP16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 CSGALNACT2Q8N6G5 542 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 EPC1Q9H2F5 836 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 C8orf33Q9H7E9 229 aaPredicted RBP16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 L1RE1Q9UN81 338 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 PCDHB5Q9Y5E4 795 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 SPTBN2O15020 2390 aa16.73■□□□□ 0.27
CLNS1A-210ENST00000528364 FRMD3A2A2Y4 597 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 MYBPHLA2RUH7 354 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 F11P03951 625 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 GARTP22102 1010 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 CDC25CP30307 473 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 CTHP32929 405 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 MLLT6P55198 1093 aaPredicted RBP16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 BFSP1Q12934 665 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 DDR2Q16832 855 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 RSPO4Q2I0M5 234 aaPredicted RBP16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 ARHGAP29Q52LW3 1261 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 MAB21L3Q8N8X9 362 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 SPPL2BQ8TCT7 592 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 BPIFB1Q8TDL5 484 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 OLFML3Q9NRN5 406 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 GKN1Q9NS71 199 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 OBP2AQ9NY56 170 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 RBAKQ9NYW8 714 aaPredicted RBP16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 SIX4Q9UIU6 781 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 MAGED2Q9UNF1 606 aaPredicted RBP16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 CCL26Q9Y258 94 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 DCHS1Q96JQ0 3298 aa16.72■□□□□ 0.27
CLNS1A-210ENST00000528364 MED19A0JLT2 244 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 CHURC1-FNTBB4DL54 471 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 EXTL3O43909 919 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 KRT19P08727 400 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 TGM1P22735 817 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 CYP2F1P24903 491 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 WEE1P30291 646 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 FNTBP49356 437 aa16.71■□□□□ 0.27
CLNS1A-210ENST00000528364 CCR3P51677 355 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms