RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 LOXL4Q96JB6 756 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 AK8Q96MA6 479 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 KIF2CQ99661 725 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 FAM83CQ9BQN1 747 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 SMG9Q9H0W8 520 aaKnown RBP17.42■□□□□ 0.38
PTPRU-210ENST00000527027 ASB7Q9H672 318 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 PARVGQ9HBI0 331 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 CNOT1A5YKK6 2376 aaKnown RBP17.42■□□□□ 0.38
PTPRU-210ENST00000527027 MAP1BP46821 2468 aaKnown RBP17.41■□□□□ 0.38
PTPRU-210ENST00000527027 CYB561D2O14569 222 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 ATG13O75143 517 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 ZNF806P0C7X5 589 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 ABCD1P33897 745 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 ACOT2P49753 483 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 RUNX3Q13761 415 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 DHX8Q14562 1220 aaKnown RBP17.41■□□□□ 0.38
PTPRU-210ENST00000527027 ST3GAL2Q16842 350 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 TMEM196Q5HYL7 178 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 IL31Q6EBC2 164 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 CACNA2D4Q7Z3S7 1137 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 SPPL2BQ8TCT7 592 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 GAB3Q8WWW8 586 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 CALML4Q96GE6 196 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 CHAMP1Q96JM3 812 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 ARRDC1-AS1Q9H2J1 176 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 C2CD2Q9Y426 696 aa17.41■□□□□ 0.38
PTPRU-210ENST00000527027 SDK1Q7Z5N4 2213 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 TRDMT1O14717 391 aaKnown RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 RPP40O75818 363 aaKnown RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 AVPR1AP37288 418 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 UBA7P41226 1012 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 PXNP49023 591 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 TAF6P49848 677 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 LIMK1P53667 647 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 GTF2BQ00403 316 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 GRSF1Q12849 480 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 SF3A2Q15428 464 aaKnown RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 AASDHQ4L235 1098 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 PKN3Q6P5Z2 889 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 PYM1Q9BRP8 204 aaKnown RBP17.4■□□□□ 0.38
PTPRU-210ENST00000527027 CCSER1Q9C0I3 900 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 ZHX3Q9H4I2 956 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 DPP3Q9NY33 737 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 SLC8A2Q9UPR5 921 aa17.4■□□□□ 0.38
PTPRU-210ENST00000527027 SOBPA7XYQ1 873 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 F11P03951 625 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 DDX6P26196 483 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 NMT1P30419 496 aaKnown RBP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 RAP1GAPP47736 663 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 AMPD2Q01433 879 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 POU5F1Q01860 360 aaKnown RBP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 WSCD1Q658N2 575 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 ADALQ6DHV7 355 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 SLFN12LQ6IEE8 588 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 FSTL4Q6MZW2 842 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 TMEM150AQ86TG1 271 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 DCP1BQ8IZD4 617 aaKnown RBP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 MAB21L3Q8N8X9 362 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 C12orf50Q8NA57 414 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 USP13Q92995 863 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-210ENST00000527027 FIZ1Q96SL8 496 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 HPS4Q9NQG7 708 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 BLOC1S4Q9NUP1 217 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 STYXL1Q9Y6J8 313 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 MYH11P35749 1972 aa17.39■□□□□ 0.37
PTPRU-210ENST00000527027 CHD6Q8TD26 2715 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 OTOL1A6NHN0 477 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-210ENST00000527027 TM4SF5O14894 197 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 EPN2O95208 641 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 HMGA1P17096 107 aaKnown RBP17.38■□□□□ 0.37
PTPRU-210ENST00000527027 KCNA4P22459 653 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 NLRP12P59046 1061 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 BFSP1Q12934 665 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 MCM6Q14566 821 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 CCDC6Q16204 474 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 CAMKK1Q8N5S9 505 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 CHFRQ96EP1 664 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 KIF9Q9HAQ2 790 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 TDP1Q9NUW8 608 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 ABI2Q9NYB9 513 aaPredicted RBP17.38■□□□□ 0.37
PTPRU-210ENST00000527027 AGO2Q9UKV8 859 aaKnown RBP17.38■□□□□ 0.37
PTPRU-210ENST00000527027 CCL26Q9Y258 94 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 PCDHB5Q9Y5E4 795 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 USP24Q9UPU5 2620 aa17.38■□□□□ 0.37
PTPRU-210ENST00000527027 KPNA7A9QM74 516 aa17.37■□□□□ 0.37
PTPRU-210ENST00000527027 H3BQV1 296 aa17.37■□□□□ 0.37
PTPRU-210ENST00000527027 TBCAO75347 108 aaKnown RBP17.37■□□□□ 0.37
PTPRU-210ENST00000527027 AKAP3O75969 853 aa17.37■□□□□ 0.37
PTPRU-210ENST00000527027 ZC2HC1CQ53FD0 456 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-210ENST00000527027 ZC3H10Q96K80 434 aaKnown RBP17.37■□□□□ 0.37
PTPRU-210ENST00000527027 ST6GALNAC4Q9H4F1 302 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms