RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 RGS9BPQ6ZS82 235 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 CAPN12Q6ZSI9 719 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 C4orf33Q8N1A6 199 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 MYLK2Q9H1R3 596 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 ZNF302Q9NR11 478 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 KCNG1Q9UIX4 513 aa12.3□□□□□ -0.44
LINC01001-201ENST00000526704 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
LINC01001-201ENST00000526704 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 BANF1O75531 89 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 UNC5CO95185 931 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 ITGAVP06756 1048 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 TNFSF9P41273 254 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 CDKN2BP42772 138 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 SLC18A1P54219 525 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 OAZ1P54368 228 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 TNFAIP1Q13829 316 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 TFDP3Q5H9I0 405 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 ZBED8Q8IZ13 594 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 NKD2Q969F2 451 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 THOC1Q96FV9 657 aaKnown RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 VPS37BQ9H9H4 285 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 SLCO1B3Q9NPD5 702 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 ADAMTS5Q9UNA0 930 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 SHOC2Q9UQ13 582 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 STK38LQ9Y2H1 464 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 C15orf41Q9Y2V0 281 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 A0A1B0GUA9 196 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 ALOX15BO15296 676 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 FAM189A1O60320 539 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 LSM8O95777 96 aaKnown RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 CST3P01034 146 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 DPEP1P16444 411 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 RPA3P35244 121 aaPredicted RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 SPARCL1Q14515 664 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 GNPTABQ3T906 1256 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 BRSK2Q8IWQ3 736 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 TMEM121Q9BTD3 319 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 VPS33BQ9H267 617 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 PCDH9Q9HC56 1237 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 SMG5Q9UPR3 1016 aaKnown RBP12.29□□□□□ -0.44
LINC01001-201ENST00000526704 CHKBQ9Y259 395 aa12.29□□□□□ -0.44
LINC01001-201ENST00000526704 LRRD1A4D1F6 860 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 TYROBPO43914 113 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 STAM2O75886 525 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 ATG7O95352 703 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 ANP32DO95626 131 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 KRT15P19012 456 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 PSMC4P43686 418 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 GPX6P59796 221 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 PDIA2Q13087 525 aaKnown RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 CAPSQ13938 189 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 SLC1A5Q15758 541 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 PDK4Q16654 411 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 DCUN1D2Q6PH85 259 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 NIPA2Q8N8Q9 360 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 FBF1Q8TES7 1133 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 UTP4Q969X6 686 aaKnown RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 IMPG2Q9BZV3 1241 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 SENP1Q9P0U3 644 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 CLUHO75153 1309 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 SSC5DA1L4H1 1573 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 A0A1W2PPM1 405 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 EDF1O60869 148 aaKnown RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 YARSP54577 528 aaKnown RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 HMGCS2P54868 508 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 GAD2Q05329 585 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 NBPF12Q5TAG4 269 aaPredicted RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 CYP4A22Q5TCH4 519 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 GPAT2Q6NUI2 795 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 CENPUQ71F23 418 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 ANKMY2Q8IV38 441 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 SLC35B2Q8TB61 432 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 NSMCE1Q8WV22 266 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 ERP27Q96DN0 273 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 MRRFQ96E11 262 aaKnown RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 MTMR12Q9C0I1 747 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 PDGFDQ9GZP0 370 aaPredicted RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 ACAD9Q9H845 621 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 TXLNGQ9NUQ3 528 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 PSMC3IPQ9P2W1 217 aaPredicted RBP12.28□□□□□ -0.44
LINC01001-201ENST00000526704 SLC24A2Q9UI40 661 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 PTPRFP10586 1907 aa12.28□□□□□ -0.44
LINC01001-201ENST00000526704 GOLGA8SH3BPF8 625 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 GOLGA8MH3BSY2 632 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 SGK1O00141 431 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 RPSAP08865 295 aaKnown RBP12.27□□□□□ -0.44
LINC01001-201ENST00000526704 FGFR1P11362 822 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 CA4P22748 312 aa12.27□□□□□ -0.44
LINC01001-201ENST00000526704 CCND1P24385 295 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms