RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TMEM119Q4V9L6 283 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 MORN5Q5VZ52 161 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 EGFLAMQ63HQ2 1017 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 FAM90A1Q86YD7 464 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 TBC1D5Q92609 795 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 FAM136AQ96C01 138 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 SERHLQ9NQF3 203 aa5.42□□□□□ -1.54
CSDE1-210ENST00000525878 GNL3LQ9NVN8 582 aaKnown RBP5.42□□□□□ -1.54
CSDE1-210ENST00000525878 TISP43B9A030 160 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 MOSPD3O75425 235 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 JTBO76095 146 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 NXPH3O95157 252 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 GNAI3P08754 354 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 FTH1P19P0C7X4 201 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 CERS1P27544 350 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 EPHB2P29323 1055 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 PRDX5P30044 214 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF135P52742 658 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ADKP55263 362 aaKnown RBP5.41□□□□□ -1.54
CSDE1-210ENST00000525878 GNAI1P63096 354 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 TUBA4AP68366 448 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 PCBP2Q15366 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ABCB5Q2M3G0 1257 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 VPS53Q5VIR6 699 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ATRIPQ8WXE1 791 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 RPL36ALQ969Q0 106 aaKnown RBP5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ZNF48Q96MX3 618 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ARHGEF3Q9NR81 526 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 ATP8A1Q9Y2Q0 1164 aa5.41□□□□□ -1.54
CSDE1-210ENST00000525878 SHTN1A0MZ66 631 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 MYO1FO00160 1098 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 GABRDO14764 452 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 XPOTO43592 962 aaKnown RBP5.4□□□□□ -1.54
CSDE1-210ENST00000525878 FAM163BP0C2L3 166 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 MYBL2P10244 700 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 RARBP10826 455 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 ITGALP20701 1170 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 CD6P30203 668 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 PIK3CGP48736 1102 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 ANKRD16Q6P6B7 361 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 DTX2Q86UW9 622 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 KLHDC4Q8TBB5 520 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 C1orf43Q9BWL3 253 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 SIK2Q9H0K1 926 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 BHMT2Q9H2M3 363 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 TRHDEQ9UKU6 1024 aa5.4□□□□□ -1.54
CSDE1-210ENST00000525878 KIF20AO95235 890 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 MTMR1Q13613 665 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 ETFDHQ16134 617 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 AARS2Q5JTZ9 985 aaKnown RBP5.39□□□□□ -1.55
CSDE1-210ENST00000525878 ZNF618Q5T7W0 954 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 TEDDM1Q5T9Z0 273 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 ZBTB9Q96C00 473 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 FCRL4Q96PJ5 515 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 TINAGL1Q9GZM7 467 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-210ENST00000525878 POLHQ9Y253 713 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 MRFAP1Q9Y605 127 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 RAD54BQ9Y620 910 aa5.39□□□□□ -1.55
CSDE1-210ENST00000525878 LRRC14BA6NHZ5 514 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 H0YIZ8 118 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 PPP6CO00743 305 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 PPM1DO15297 605 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 IGKV2-30P06310 120 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 PDHA1P08559 390 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 NDUFB7P17568 137 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 CHRM3P20309 590 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 GCLCP48506 637 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-210ENST00000525878 BOP1Q14137 746 aaKnown RBP5.38□□□□□ -1.55
CSDE1-210ENST00000525878 YTHDF3Q7Z739 585 aaKnown RBP5.38□□□□□ -1.55
CSDE1-210ENST00000525878 C3orf20Q8ND61 904 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 NELL2Q99435 816 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 QTRT1Q9BXR0 403 aaKnown RBP5.38□□□□□ -1.55
CSDE1-210ENST00000525878 NRIP3Q9NQ35 241 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 DLL3Q9NYJ7 618 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 ZDHHC8Q9ULC8 765 aa5.38□□□□□ -1.55
CSDE1-210ENST00000525878 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 ADAMTS3O15072 1205 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 VPS4BO75351 444 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 ARIH2O95376 493 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 TUBB4AP04350 444 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 SMARCA1P28370 1054 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 MPGP29372 298 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 ODF1Q14990 250 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 UAP1L1Q3KQV9 507 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 SUPT20HL1Q3ZLR7 823 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 CEP78Q5JTW2 689 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 PRAMEF17Q5VTA0 474 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 WDR53Q7Z5U6 358 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-210ENST00000525878 USP37Q86T82 979 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 SLC13A1Q9BZW2 595 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 CCDC8Q9H0W5 538 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-210ENST00000525878 SH3BP4Q9P0V3 963 aa5.37□□□□□ -1.55
CSDE1-210ENST00000525878 PRRT4C9JH25 899 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 ZRANB2O95218 330 aaKnown RBP eCLIP5.36□□□□□ -1.55
CSDE1-210ENST00000525878 SFPQP23246 707 aaKnown RBP eCLIP5.36□□□□□ -1.55
CSDE1-210ENST00000525878 PHKA1P46020 1223 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 ALDH9A1P49189 494 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 EFCAB2Q5VUJ9 269 aa5.36□□□□□ -1.55
CSDE1-210ENST00000525878 SLC18B1Q6NT16 456 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms