RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 COA7Q96BR5 231 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 GNRHR2Q96P88 292 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 UPF3BQ9BZI7 483 aaKnown RBP5.97□□□□□ -1.45
SVIP-202ENST00000525670 SPATC1LQ9H0A9 340 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 SIRPGQ9P1W8 387 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 ARHGAP28Q9P2N2 729 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 RIPK3Q9Y572 518 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 ATP23Q9Y6H3 246 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 FRMPD3Q5JV73 1810 aa5.97□□□□□ -1.45
SVIP-202ENST00000525670 ZNFX1Q9P2E3 1918 aaKnown RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 ERICH2A1L162 156 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 SH2B2O14492 632 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 FOXS1O43638 330 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZBED4O75132 1171 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 PLEKHA8P1O95397 391 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZNF888P0CJ79 500 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 SRGAP2CP0DJJ0 459 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 PYGMP11217 842 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZKSCAN1P17029 563 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 ATP2B1P20020 1258 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 CASTP20810 708 aaKnown RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 ADORA2AP29274 412 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZNF543Q08ER8 600 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 TOP3AQ13472 1001 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 CRY1Q16526 586 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 LONRF2Q1L5Z9 754 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZNF568Q3ZCX4 644 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 MUM1L1Q5H9M0 696 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 FIGNQ5HY92 759 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 TAX1BP1Q86VP1 789 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 PTRH1Q86Y79 214 aaKnown RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 GIMAP8Q8ND71 665 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 GMCL1P1Q8NEA9 526 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 REPS2Q8NFH8 660 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 TRIB2Q92519 343 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 NEIL1Q96FI4 390 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 SORCS2Q96PQ0 1159 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 LRRC37BQ96QE4 947 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 DHRS4Q9BTZ2 278 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZNF747Q9BV97 191 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 LY9Q9HBG7 655 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 RNF146Q9NTX7 359 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 FLRT1Q9NZU1 646 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 MORF4L1Q9UBU8 362 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 CCPG1Q9ULG6 757 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 CBLCQ9ULV8 474 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZFR2Q9UPR6 939 aaKnown RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 RABGAP1Q9Y3P9 1069 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 SNX14Q9Y5W7 946 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 LRRC37A2A6NM11 1700 aa5.96□□□□□ -1.46
SVIP-202ENST00000525670 TNRC18O15417 2968 aaPredicted RBP5.96□□□□□ -1.46
SVIP-202ENST00000525670 ZNF236Q9UL36 1845 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CCDC69A6NI79 296 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 GOLGA8BA8MQT2 603 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 AMHP03971 560 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 PARP1P09874 1014 aaKnown RBP5.95□□□□□ -1.46
SVIP-202ENST00000525670 FAM153BP0C7A2 387 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 KRT15P19012 456 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 PTGS1P23219 599 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CNGA1P29973 690 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CCND3P30281 292 aaPredicted RBP5.95□□□□□ -1.46
SVIP-202ENST00000525670 MAPK4P31152 587 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CYP2C19P33261 490 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 STAT3P40763 770 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 GDF5P43026 501 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 JAM2P57087 298 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CCNA1P78396 465 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 STK3Q13188 491 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 SART3Q15020 963 aaKnown RBP5.95□□□□□ -1.46
SVIP-202ENST00000525670 NECTIN1Q15223 517 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 SEC23AQ15436 765 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CDC37Q16543 378 aaPredicted RBP5.95□□□□□ -1.46
SVIP-202ENST00000525670 WDR72Q3MJ13 1102 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 FAM47CQ5HY64 1035 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 PRAMEF19Q5SWL8 479 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 SLC30A10Q6XR72 485 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 DNAH12Q6ZR08 3092 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 CXXC5Q7LFL8 322 aaKnown RBP5.95□□□□□ -1.46
SVIP-202ENST00000525670 DPP9Q86TI2 863 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 Q8N1X5 172 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 MKL1Q969V6 931 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 NEK1Q96PY6 1258 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 TEX13BQ9BXU2 312 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 VPS11Q9H270 941 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 FEM1BQ9UK73 627 aa5.95□□□□□ -1.46
SVIP-202ENST00000525670 KLF18A0A0U1RQI7 1052 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 PTPDC1A2A3K4 754 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 GOLGA8AA7E2F4 631 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 FZD7O75084 574 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 CLASP2O75122 1294 aaKnown RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 REC8O95072 547 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 PCP11498 1178 aaKnown RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 CCL5P13501 91 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 EN2P19622 333 aaPredicted RBP5.94□□□□□ -1.46
SVIP-202ENST00000525670 CALML3P27482 149 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 HOXD10P28358 340 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 MCM5P33992 734 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 ACVRL1P37023 503 aa5.94□□□□□ -1.46
SVIP-202ENST00000525670 RGS2P41220 211 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms