RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 LRRC19Q9H756 370 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 ADAMTS6Q9UKP5 1117 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 SMG5Q9UPR3 1016 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 ANKRD31Q8N7Z5 1873 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 GOLGA8SH3BPF8 625 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 GOLGA8MH3BSY2 632 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 LSM1O15116 133 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 PRPF4O43172 522 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 GGPS1O95749 300 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 LDHBP07195 334 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TSPY3P0CV98 308 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TSPY8P0CW00 308 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 BCRP11274 1271 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 COL6A2P12110 1019 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 ANXA13P27216 316 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 CD97P48960 835 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 GPC5P78333 572 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 UBE2SQ16763 222 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 MYLK3Q32MK0 819 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 RNF111Q6ZNA4 994 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TTC17Q96AE7 1141 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 OXNAD1Q96HP4 312 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TTC25Q96NG3 672 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 TUBB6Q9BUF5 446 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 MRPL1Q9BYD6 325 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 EURLQ9NYK6 297 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 UBAP1Q9NZ09 502 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 MARCOQ9UEW3 520 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
CLNS1A-204ENST00000525428 CAPN8A6NHC0 703 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 H3BSA7 217 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TRPA1O75762 1119 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 GCNT3O95395 438 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 GJC1P36383 396 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 RPL5P46777 297 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 EFTUD2Q15029 972 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■■□□ 17.4
CLNS1A-204ENST00000525428 CBWD6Q4V339 395 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 CBWD3Q5JTY5 395 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 CBWD5Q5RIA9 395 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 NANOGNBQ7Z5D8 188 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 DHDDSQ86SQ9 333 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TAB3Q8N5C8 712 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 SRPK1Q96SB4 655 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 AGPAT1Q99943 283 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 KCNK13Q9HB14 408 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 ARHGEF4Q9NR80 690 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TMOD2Q9NZR1 351 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 DUOX1Q9NRD9 1551 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 FGRP09769 529 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 SLC5A2P31639 672 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 GSTM4Q03013 218 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 LMNB2Q03252 620 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 FOLH1Q04609 750 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TBL3Q12788 808 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 GK3PQ14409 553 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TRMT5Q32P41 509 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 TMPRSS6Q8IU80 811 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 ANKMY2Q8IV38 441 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 CERS5Q8N5B7 392 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 SKA1Q96BD8 255 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 NUP85Q9BW27 656 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 SHCBP1LQ9BZQ2 653 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 WNT8AQ9H1J5 351 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
CLNS1A-204ENST00000525428 F8W8V4 182 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 TYROBPO43914 113 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 CAPN15O75808 1086 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 SMIM18P0DKX4 95 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 PMLP29590 882 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 STT3AP46977 705 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 RXRGP48443 463 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 ALDH18A1P54886 795 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 PHEXP78562 749 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 PDIA2Q13087 525 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 C16orf72Q14CZ0 275 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 ARSHQ5FYA8 562 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 C11orf63Q6NUN7 778 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 NET1Q7Z628 596 aaPredicted RBP11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 ZBED8Q8IZ13 594 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 POU5F2Q8N7G0 328 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 FNDC8Q8TC99 324 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 CFAP57Q96MR6 1250 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 PRPF18Q99633 342 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 GPR88Q9GZN0 384 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 MYO3BQ8WXR4 1341 aa11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 FOXD2O60548 495 aaPredicted RBP11.82□□□□□ -0.52
CLNS1A-204ENST00000525428 TRMUO75648 421 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms