RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SDK2Q58EX2 2172 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 IBTKQ9P2D0 1353 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 FAM149AA5PLN7 773 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 WNT9AO14904 365 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 N4BP1O75113 896 aaKnown RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 GLRX3O76003 335 aaKnown RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 RB1P06400 928 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 MYCLP1P12525 358 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 BMPR1AP36894 532 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 SLC6A11P48066 632 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 CDR1P51861 262 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 CACNB3P54284 484 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 CYP4F8P98187 520 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 EXOSC10Q01780 885 aaKnown RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 TRIM61Q5EBN2 209 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 EMC4Q5J8M3 183 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 ZNF484Q5JVG2 852 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 C1orf141Q5JVX7 400 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 ADGRF1Q5T601 910 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 XRRA1Q6P2D8 792 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 PAQR3Q6TCH7 311 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 DPP9Q86TI2 863 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 KBTBD6Q86V97 674 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 DDX42Q86XP3 938 aaKnown RBP eCLIP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 IGDCC3Q8IVU1 814 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 ARID3BQ8IVW6 561 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 SIRT2Q8IXJ6 389 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 RAVER1Q8IY67 606 aaKnown RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 GSTCDQ8NEC7 633 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 CHST13Q8NET6 341 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 CHAC2Q8WUX2 184 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 KCTD13Q8WZ19 329 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 C8orf48Q96LL4 319 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 NECTIN4Q96NY8 510 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 DIRC2Q96SL1 478 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 ZFYVE21Q9BQ24 234 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 GPR27Q9NS67 375 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 GULP1Q9UBP9 304 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 DBR1Q9UK59 544 aaKnown RBP3.81□□□□□ -1.8
CSDE1-209ENST00000525132 PCDHGA5Q9Y5G8 931 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 PCDHA5Q9Y5H7 936 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 NLRC5Q86WI3 1866 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 DOCK2Q92608 1830 aa3.81□□□□□ -1.8
CSDE1-209ENST00000525132 MXRA5Q9NR99 2828 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TRAV20A0A0B4J274 112 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 AGRPO00253 132 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 ETV2O00321 342 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 MEFVO15553 781 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 HNRNPRO43390 633 aaKnown RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 EIF3JO75822 258 aaKnown RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TACR1P25103 407 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 ECI1P42126 302 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 MAGEA9P43362 315 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TMPRSS3P57727 454 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 RHBDL3P58872 404 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 SEMA3BQ13214 749 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 BIRC2Q13490 618 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 ITGA7Q13683 1181 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 FAM50AQ14320 339 aaKnown RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 GRB14Q14449 540 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 GPNMBQ14956 572 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 NR1I3Q14994 352 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 SKIDA1Q1XH10 827 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 PREPLQ4J6C6 727 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 FHL5Q5TD97 284 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TMEM198Q66K66 360 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 WWC2Q6AWC2 1192 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 MPZL3Q6UWV2 235 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TMEM184AQ6ZMB5 413 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TOGARAM2Q6ZUX3 1019 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 WDR75Q8IWA0 830 aaKnown RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 ZSWIM2Q8NEG5 633 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 DIO2Q92813 273 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 TSR2Q969E8 191 aaKnown RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 CLDN23Q96B33 292 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 PAGR1Q9BTK6 254 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 ADAM7Q9H2U9 754 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 PRDM16Q9HAZ2 1276 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 DCP1AQ9NPI6 582 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 USP40Q9NVE5 1235 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 FBXO28Q9NVF7 368 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 RWDD3Q9Y3V2 267 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 USP16Q9Y5T5 823 aa3.8□□□□□ -1.8
CSDE1-209ENST00000525132 ASCC3Q8N3C0 2202 aaKnown RBP3.8□□□□□ -1.8
CSDE1-209ENST00000525132 FNDC1Q4ZHG4 1894 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-209ENST00000525132 ANKRD36CQ5JPF3 1778 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 ALG1L2C9J202 215 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 H7BY64 318 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 ABLIM1O14639 778 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 N4BP3O15049 544 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 PRODHO43272 600 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 NPHS1O60500 1241 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 TADA3O75528 432 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 CAVIN2O95810 425 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 MPOP05164 745 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 LINC00271P0C7V0 271 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 NR1D1P20393 614 aa3.79□□□□□ -1.8
CSDE1-209ENST00000525132 ARL4AP40617 200 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms