RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-208ENST00000525076 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 ANKRD63C9JTQ0 380 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 HRO43593 1189 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 PRAMEF12O95522 483 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 MCM2P49736 904 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 POU5F1Q01860 360 aaKnown RBP16.41■□□□□ 0.22
CTSB-208ENST00000525076 DMWDQ09019 674 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 ZC2HC1CQ53FD0 456 aaPredicted RBP16.41■□□□□ 0.22
CTSB-208ENST00000525076 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
CTSB-208ENST00000525076 HEATR6Q6AI08 1181 aaKnown RBP16.41■□□□□ 0.22
CTSB-208ENST00000525076 DCP1BQ8IZD4 617 aaKnown RBP16.41■□□□□ 0.22
CTSB-208ENST00000525076 NETO1Q8TDF5 533 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 LRRC15Q8TF66 581 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 FIZ1Q96SL8 496 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.41■□□□□ 0.22
CTSB-208ENST00000525076 STYXL1Q9Y6J8 313 aa16.41■□□□□ 0.22
CTSB-208ENST00000525076 KIF26AQ9ULI4 1882 aaPredicted RBP16.4■□□□□ 0.22
CTSB-208ENST00000525076 K7ESF4 209 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 ATF6P18850 670 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 DDIT3P35638 169 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 AVPR1AP37288 418 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 CDR1P51861 262 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 TNK2Q07912 1038 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 CCINQ13939 588 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 ITPRIPL2Q3MIP1 535 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 SV2CQ496J9 727 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 CEP68Q76N32 757 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 BRAPQ7Z569 592 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 GIPC2Q8TF65 315 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 POMGNT1Q8WZA1 660 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 SEMA4GQ9NTN9 838 aa16.4■□□□□ 0.22
CTSB-208ENST00000525076 ABI2Q9NYB9 513 aaPredicted RBP16.4■□□□□ 0.22
CTSB-208ENST00000525076 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
CTSB-208ENST00000525076 ZNF638Q14966 1978 aaKnown RBP16.4■□□□□ 0.22
CTSB-208ENST00000525076 KPNA7A9QM74 516 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 TISP43B9A030 160 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
CTSB-208ENST00000525076 FOXD2O60548 495 aaPredicted RBP16.39■□□□□ 0.21
CTSB-208ENST00000525076 IL18RAPO95256 599 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 HAPLN1P10915 354 aaPredicted RBP16.39■□□□□ 0.21
CTSB-208ENST00000525076 HOXA6P31267 233 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 GRIN1Q05586 938 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 SRSF5Q13243 272 aaKnown RBP16.39■□□□□ 0.21
CTSB-208ENST00000525076 POSTNQ15063 836 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 CSRP2Q16527 193 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 WDR44Q5JSH3 913 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 PRR23CQ6ZRP0 262 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 LRRTM3Q86VH5 581 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 NT5DC4Q86YG4 428 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 CMTM8Q8IZV2 173 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 ZNF560Q96MR9 790 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 SLC46A2Q9BY10 475 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 SMG9Q9H0W8 520 aaKnown RBP16.39■□□□□ 0.21
CTSB-208ENST00000525076 IL21Q9HBE4 155 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 SDK1Q7Z5N4 2213 aa16.39■□□□□ 0.21
CTSB-208ENST00000525076 CNOT1A5YKK6 2376 aaKnown RBP16.38■□□□□ 0.21
CTSB-208ENST00000525076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
CTSB-208ENST00000525076 SLC30A4O14863 429 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTSB-208ENST00000525076 PNPLA4P41247 253 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 TSPY1Q01534 308 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 GRSF1Q12849 480 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTSB-208ENST00000525076 BFSP1Q12934 665 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 SF3A1Q15459 793 aaKnown RBP16.38■□□□□ 0.21
CTSB-208ENST00000525076 ZNF720Q7Z2F6 126 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 WDR5BQ86VZ2 330 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 CNTNAP3BQ96NU0 1288 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 CNTNAP3Q9BZ76 1288 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 UPF2Q9HAU5 1272 aaKnown RBP16.38■□□□□ 0.21
CTSB-208ENST00000525076 GKN1Q9NS71 199 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 CCDC39Q9UFE4 941 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 EXOC7Q9UPT5 735 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 PCDHB5Q9Y5E4 795 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 DENND4CQ5VZ89 1909 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 CHD8Q9HCK8 2581 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 SPAG17Q6Q759 2223 aa16.38■□□□□ 0.21
CTSB-208ENST00000525076 ATG13O75143 517 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 CD2BP2O95400 341 aaKnown RBP16.37■□□□□ 0.21
CTSB-208ENST00000525076 AMPD2Q01433 879 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 NFE2Q16621 373 aaPredicted RBP16.37■□□□□ 0.21
CTSB-208ENST00000525076 CC2D1AQ6P1N0 951 aaPredicted RBP16.37■□□□□ 0.21
CTSB-208ENST00000525076 DYMQ7RTS9 669 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 SFR1Q86XK3 245 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 EFCAB13Q8IY85 973 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 MAB21L3Q8N8X9 362 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 MRPS31Q92665 395 aaKnown RBP16.37■□□□□ 0.21
CTSB-208ENST00000525076 MRPL44Q9H9J2 332 aaKnown RBP16.37■□□□□ 0.21
CTSB-208ENST00000525076 KIF9Q9HAQ2 790 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 C2orf42Q9NWW7 574 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 SEL1LQ9UBV2 794 aa16.37■□□□□ 0.21
CTSB-208ENST00000525076 SOBPA7XYQ1 873 aa16.36■□□□□ 0.21
CTSB-208ENST00000525076 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
CTSB-208ENST00000525076 CSH1P0DML2 217 aa16.36■□□□□ 0.21
CTSB-208ENST00000525076 CSH2P0DML3 217 aa16.36■□□□□ 0.21
CTSB-208ENST00000525076 NLRP12P59046 1061 aa16.36■□□□□ 0.21
CTSB-208ENST00000525076 TFAMQ00059 246 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms