RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 SHISA8B8ZZ34 492 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 CCDC188H7C350 402 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 HAS3O00219 553 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 CA12O43570 354 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 PHACTR2O75167 634 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ZRANB2O95218 330 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTR9-202ENST00000524523 KIF4AO95239 1232 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 VNN1O95497 513 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 LSM8O95777 96 aaKnown RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 TNNC2P02585 160 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 FAM163BP0C2L3 166 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 P4HA1P13674 534 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ADCYAP1R1P41586 468 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 PIK3CAP42336 1068 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 SLC1A1P43005 524 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 MATR3P43243 847 aaKnown RBP eCLIP8.04□□□□□ -1.12
CTR9-202ENST00000524523 NOP2P46087 812 aaKnown RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 ACOT2P49753 483 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 DCAF4L1Q3SXM0 396 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 TEX35Q5T0J7 233 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 TDRD10Q5VZ19 366 aaKnown RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 FBXO38Q6PIJ6 1188 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 PEX26Q7Z412 305 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 SYT9Q86SS6 491 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 NT5DC3Q86UY8 548 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 RPUSD2Q8IZ73 545 aaKnown RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 KIAA0319LQ8IZA0 1049 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 METTL13Q8N6R0 699 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ZSWIM2Q8NEG5 633 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 OR6J1Q8NGC5 347 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 COPS5Q92905 334 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ANKRD36BP1Q96IX9 119 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ZBTB45Q96K62 511 aaPredicted RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 POP1Q99575 1024 aaKnown RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 APBA2Q99767 749 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ADPGKQ9BRR6 497 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 WNT8AQ9H1J5 351 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ANKZF1Q9H8Y5 726 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 RPF1Q9H9Y2 349 aaKnown RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 CYP3A43Q9HB55 503 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 CXXC1Q9P0U4 656 aaPredicted RBP8.04□□□□□ -1.12
CTR9-202ENST00000524523 TMEM59LQ9UK28 342 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 GJD2Q9UKL4 321 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 C2CD2Q9Y426 696 aa8.04□□□□□ -1.12
CTR9-202ENST00000524523 ARID2Q68CP9 1835 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 CCDC66A2RUB6 948 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 INO80B-WBP1J3KQ70 363 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 CYP26A1O43174 497 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 BUB1O43683 1085 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 DUSP11O75319 330 aaKnown RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 SGPL1O95470 568 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 CYP1A1P04798 512 aaPredicted RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 PAEPP09466 180 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 ZNF865P0CJ78 1059 aaPredicted RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 UNGP13051 313 aaPredicted RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 EPB42P16452 691 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 ZSCAN20P17040 1043 aaPredicted RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 CHRNB2P17787 502 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 ACO1P21399 889 aaKnown RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 MARK3P27448 753 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 HOXC8P31273 242 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 ZNF132P52740 706 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 ADAM17P78536 824 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 FMO1Q01740 532 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 TAP1Q03518 808 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 PPFIA1Q13136 1202 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 DRP2Q13474 957 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 BIRC3Q13489 604 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 TRPC3Q13507 836 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 GRIK4Q16099 956 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 CLEC16AQ2KHT3 1053 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 ZNF568Q3ZCX4 644 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 MARCH8Q5T0T0 291 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 CC2D1AQ6P1N0 951 aaPredicted RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 DAAM2Q86T65 1068 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 RPAINQ86UA6 219 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 EFCAB13Q8IY85 973 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 LRRC71Q8N4P6 559 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 UBL4BQ8N7F7 174 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 UBR7Q8N806 425 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 USP38Q8NB14 1042 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 NPLOC4Q8TAT6 608 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 CAGE1Q8TC20 777 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 RUNDC3BQ96NL0 473 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 MMS19Q96T76 1030 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 SLC30A3Q99726 388 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 PACSIN1Q9BY11 444 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 GCOM2Q9BZD3 368 aaPredicted RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 DNAI2Q9GZS0 605 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 AP5M1Q9H0R1 490 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 VIPAS39Q9H9C1 493 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 MRPL47Q9HD33 250 aaKnown RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 HDAC6Q9UBN7 1215 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 PUF60Q9UHX1 559 aaKnown RBP8.03□□□□□ -1.12
CTR9-202ENST00000524523 KLF15Q9UIH9 416 aa8.03□□□□□ -1.12
CTR9-202ENST00000524523 L1RE1Q9UN81 338 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms