RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	RECQL	P46063	649 aa	Predicted RBP	5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	ALDH5A1	P51649	535 aa	Predicted RBP	5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	GTF2H3	Q13889	308 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	TOMM20	Q15388	145 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	DDB1	Q16531	1140 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	HYI	Q5T013	277 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	PIK3R6	Q5UE93	754 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	JAKMIP3	Q5VZ66	844 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	GPR149	Q86SP6	731 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	NXPE1	Q8N323	547 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	CCDC89	Q8N998	374 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	DDB2	Q92466	427 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	ERP27	Q96DN0	273 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	CLIC5	Q9NZA1	410 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	DNM3	Q9UQ16	869 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	CAMSAP2	Q08AD1	1489 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	LRRC9	Q6ZRR7	1453 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356	BCL9L	Q86UU0	1499 aa		5.11	□□□□□ -1.59
PCM1-223	ENST00000524356		A0A0A6YYJ9	748 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	PRR5-ARHGAP8	B1AHC4	643 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ANP32C	O43423	234 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	EFCAB14	O75071	495 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ATRN	O75882	1429 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ZFYVE9	O95405	1425 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	CELA2A	P08217	269 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	SETSIP	P0DME0	302 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	TNFAIP3	P21580	790 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	RRM1	P23921	792 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	CCND1	P24385	295 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	NOS1	P29475	1434 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	BCAR1	P56945	870 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	MST1R	Q04912	1400 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ADCY1	Q08828	1119 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	KLF1	Q13351	362 aa	Predicted RBP	5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	PUM3	Q15397	648 aa	Known RBP	5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ELF2	Q15723	593 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	CEP162	Q5TB80	1403 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	AHDC1	Q5TGY3	1603 aa	Predicted RBP	5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	B3GNT9	Q6UX72	402 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356		Q6ZNX1	250 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	FAM186B	Q8IYM0	893 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	OR10H5	Q8NGA6	315 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	HSPBAP1	Q96EW2	488 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	PDLIM2	Q96JY6	352 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	TNIP3	Q96KP6	325 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	FYCO1	Q9BQS8	1478 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ALOXE3	Q9BYJ1	711 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	SPON1	Q9HCB6	807 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	HDAC9	Q9UKV0	1011 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	ASAP1	Q9ULH1	1129 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	PLEKHG1	Q9ULL1	1385 aa		5.1	□□□□□ -1.59
PCM1-223	ENST00000524356	EFCAB6	Q5THR3	1501 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	NKTR	P30414	1462 aa	Known RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	RIMS2	Q9UQ26	1411 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	hCG_1984214	I3L0E3	225 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	DVL2	O14641	736 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	FSBP	O95073	299 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	CBSL	P0DN79	551 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	RHCE	P18577	417 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	YY1	P25490	414 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	CBS	P35520	551 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	FLT3	P36888	993 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	TM4SF4	P48230	202 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	GZMK	P49863	264 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	SCNN1B	P51168	640 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	AK2	P54819	239 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	IL2	P60568	153 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	RHD	Q02161	417 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	DSG1	Q02413	1049 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	TRIM14	Q14142	442 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	METRNL	Q641Q3	311 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	ABHD17C	Q6PCB6	329 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	LDHAL6A	Q6ZMR3	332 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	CHST15	Q7LFX5	561 aa	Predicted RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	OTOP1	Q7RTM1	612 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	SMC1B	Q8NDV3	1235 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	RPGR	Q92834	1020 aa	Known RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	TAAR9	Q96RI9	348 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	TUBGCP5	Q96RT8	1024 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	NEU1	Q99519	415 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	ORAI3	Q9BRQ5	295 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	NMRK2	Q9NPI5	230 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	ASB6	Q9NWX5	421 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	PGAP2	Q9UHJ9	254 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	POLG2	Q9UHN1	485 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	EVL	Q9UI08	416 aa	Predicted RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	FBXO2	Q9UK22	296 aa	Predicted RBP	5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	RABGAP1	Q9Y3P9	1069 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	FPGT-TNNI3K	V9GXZ4	949 aa		5.09	□□□□□ -1.59
PCM1-223	ENST00000524356	CEP152	O94986	1710 aa		5.09	□□□□□ -1.6
PCM1-223	ENST00000524356	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	5.09	□□□□□ -1.6
PCM1-223	ENST00000524356	NWD1	Q149M9	1564 aa		5.08	□□□□□ -1.6
PCM1-223	ENST00000524356	NCOA3	Q9Y6Q9	1424 aa		5.08	□□□□□ -1.6
PCM1-223	ENST00000524356	MET	P08581	1390 aa		5.08	□□□□□ -1.6
PCM1-223	ENST00000524356	TPP1	O14773	563 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms