RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ACAP1Q15027 740 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 HADHQ16836 314 aaKnown RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 LCLAT1Q6UWP7 414 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 MRPL10Q7Z7H8 261 aaKnown RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 METTL23Q86XA0 190 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 TMEM86AQ8N2M4 240 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 SLC4A11Q8NBS3 891 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 C3orf20Q8ND61 904 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 C1orf131Q8NDD1 294 aaKnown RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 PPP1R13LQ8WUF5 828 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 ZNF296Q8WUU4 475 aaPredicted RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 TSC1Q92574 1164 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 ELMO3Q96BJ8 720 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 RNPC3Q96LT9 517 aaKnown RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 HOMER3Q9NSC5 361 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 PACSIN2Q9UNF0 486 aaPredicted RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 COG5Q9UP83 839 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 PHF24Q9UPV7 400 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 HES2Q9Y543 173 aa10.57□□□□□ -0.72
VPS13B-212ENST00000524330 TRIP12Q14669 1992 aaPredicted RBP10.57□□□□□ -0.72
VPS13B-212ENST00000524330 ARVCFO00192 962 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 DDX3YO15523 660 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 MICAL2O94851 1124 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 GBP1P32455 592 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 GNL1P36915 607 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 SSR1P43307 286 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 ACADSBP45954 432 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 LHX1P48742 406 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 CDH8P55286 799 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 GSCP56915 257 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 PSMC1P62191 440 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 MAMLD1Q13495 774 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 NAA30Q147X3 362 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 GLRA4Q5JXX5 417 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 ZFYVE27Q5T4F4 411 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 FBXO38Q6PIJ6 1188 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 DNAAF5Q86Y56 855 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 ZDHHC17Q8IUH5 632 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 SMG8Q8ND04 991 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 LRRN4CLQ8ND94 238 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 CXorf38Q8TB03 319 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 URGCPQ8TCY9 931 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 RSPH1Q8WYR4 309 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 RBM41Q96IZ5 413 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 ELOVL4Q9GZR5 314 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 RAB17Q9H0T7 212 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 DDX56Q9NY93 547 aaKnown RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 TUBGCP4Q9UGJ1 667 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 FEZ2Q9UHY8 353 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-212ENST00000524330 DSEQ9UL01 958 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 PADI3Q9ULW8 664 aa10.56□□□□□ -0.72
VPS13B-212ENST00000524330 A0A0U1RQF3 1178 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 A0A1W2PQ45 241 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 A0A1W2PQY0 241 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 SIGLEC16A6NMB1 481 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 O00370 1275 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 PDE2AO00408 941 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 DNM1LO00429 736 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 RNF8O76064 485 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 EOMESO95936 686 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 FGGP02679 453 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 GHRP10912 638 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 KRT3P12035 628 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 COL6A1P12109 1028 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 WARSP23381 471 aaKnown RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 CD52P31358 61 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 CLCN6P51797 869 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 GUCY2FP51841 1108 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 BCAT1P54687 386 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 GRIK3Q13003 919 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 DHX34Q14147 1143 aaKnown RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 LRRC38Q5VT99 294 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 ARHGAP17Q68EM7 881 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 DENND1BQ6P3S1 775 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 DSTYKQ6XUX3 929 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 HDXQ7Z353 690 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 EIF1ADQ8N9N8 165 aaKnown RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 NOA1Q8NC60 698 aaKnown RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 FNIP1Q8TF40 1166 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 STK32AQ8WU08 396 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 ZMAT2Q96NC0 199 aaKnown RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 SDCBP2Q9H190 292 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-212ENST00000524330 ANKZF1Q9H8Y5 726 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 RSAD1Q9HA92 442 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 ASNSD1Q9NWL6 643 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 STIM2Q9P246 746 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 THSD7BQ9C0I4 1608 aa10.55□□□□□ -0.72
VPS13B-212ENST00000524330 FAM187AA6NFU0 413 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms