RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KCNA2P16389 499 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 VIPR2P41587 438 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 CARSP49589 748 aaKnown RBP4.72□□□□□ -1.65
SKP1-212ENST00000523966 MAPK10P53779 464 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 WNT3P56703 355 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 CHAF1AQ13111 956 aaPredicted RBP4.72□□□□□ -1.65
SKP1-212ENST00000523966 INSCQ1MX18 579 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 MGAT5BQ3V5L5 792 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 NRN1LQ496H8 165 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 FBLN7Q53RD9 439 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 COLGALT2Q8IYK4 626 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 SYNE4Q8N205 404 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 PSD4Q8NDX1 1056 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 VPS37AQ8NEZ2 397 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 BRI3BPQ8WY22 251 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 RAPGEF4Q8WZA2 1011 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 SGCZQ96LD1 299 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 C20orf173Q96LM9 149 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 WWC2-AS2Q96NR7 200 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 SLC46A1Q96NT5 459 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 PPP1R9BQ96SB3 815 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 VKORC1Q9BQB6 163 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 COLEC11Q9BWP8 271 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 EIF2AQ9BY44 585 aaKnown RBP4.72□□□□□ -1.65
SKP1-212ENST00000523966 TBC1D23Q9NUY8 699 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 HESX1Q9UBX0 185 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 ZNF212Q9UDV6 495 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 TAGLN3Q9UI15 199 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 KCNE5Q9UJ90 142 aa4.72□□□□□ -1.65
SKP1-212ENST00000523966 E7ENX8 843 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 F5H423 210 aaPredicted RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 F5H697 171 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 TRIAP1O43715 76 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 FOXD2O60548 495 aaPredicted RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 NDUFA10O95299 355 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 MT-ND5P03915 603 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 IDEP14735 1019 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 CHRM3P20309 590 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 LRPAP1P30533 357 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 TECP42680 631 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 GCLCP48506 637 aaPredicted RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 PXNP49023 591 aaPredicted RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 PTTG1IPP53801 180 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 RPS7P62081 194 aaKnown RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 TAP2Q03519 686 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 OCA2Q04671 838 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 STK3Q13188 491 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 SLC29A2Q14542 456 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 USP39Q53GS9 565 aaKnown RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 C10orf62Q5T681 223 aaPredicted RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 DCAF12L1Q5VU92 463 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 METRNLQ641Q3 311 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 XRRA1Q6P2D8 792 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 UNC13DQ70J99 1090 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 MICU3Q86XE3 530 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 TMEM132CQ8N3T6 1108 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 SNX19Q92543 992 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 MAML1Q92585 1016 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 ZNF566Q969W8 418 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 ARPC5LQ9BPX5 153 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 ALOXE3Q9BYJ1 711 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 GALNT9Q9HCQ5 603 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 AKIP1Q9NQ31 210 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 HSFX1Q9UBD0 423 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 MAGED2Q9UNF1 606 aaPredicted RBP4.71□□□□□ -1.66
SKP1-212ENST00000523966 TESMINQ9Y4I5 508 aa4.71□□□□□ -1.66
SKP1-212ENST00000523966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.71□□□□□ -1.66
SKP1-212ENST00000523966 PRAMEF33A0A0G2JMD5 474 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 LOC102723971A0A1B0GUV8 181 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 MYADML2A6NDP7 307 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 AHRRA9YTQ3 701 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 TMEM233B4DJY2 109 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 F8W8V4 182 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 NCK2O43639 380 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 RGS10O43665 173 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 PRAMEF10O60809 474 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 NCR1O76036 304 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 CFIP05156 583 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 TXNP10599 105 aaKnown RBP4.7□□□□□ -1.66
SKP1-212ENST00000523966 TSHRP16473 764 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 LAG3P18627 525 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 FDXRP22570 491 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 SERPINB3P29508 390 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 MAGEA10P43363 369 aaPredicted RBP4.7□□□□□ -1.66
SKP1-212ENST00000523966 ANXA11P50995 505 aaKnown RBP4.7□□□□□ -1.66
SKP1-212ENST00000523966 LOXL3P58215 753 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 TCF15Q12870 199 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 RESTQ13127 1097 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 PLA1AQ53H76 456 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 DGKKQ5KSL6 1271 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 KLHDC7AQ5VTJ3 777 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 SFRP4Q6FHJ7 346 aaPredicted RBP4.7□□□□□ -1.66
SKP1-212ENST00000523966 HIBCHQ6NVY1 386 aaPredicted RBP4.7□□□□□ -1.66
SKP1-212ENST00000523966 TAF2Q6P1X5 1199 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 PPP1R32Q7Z5V6 425 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 SKAP1Q86WV1 359 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 SYTL1Q8IYJ3 562 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 ZNF276Q8N554 614 aa4.7□□□□□ -1.66
SKP1-212ENST00000523966 POC1BQ8TC44 478 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms