RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PDE1BQ01064 536 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 CNGA3Q16281 694 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 ACBD5Q5T8D3 534 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 ZC3H3Q8IXZ2 948 aaKnown RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 ZDHHC14Q8IZN3 488 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 TRIML2Q8N7C3 387 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 PYDC1Q8WXC3 89 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 SLC7A6OSQ96CW6 309 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 SENP7Q9BQF6 1050 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 KCND2Q9NZV8 630 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 BCAP29Q9UHQ4 241 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 TAGLN3Q9UI15 199 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 MYH1P12882 1939 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 MYH4Q9Y623 1939 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 TESPA1A2RU30 521 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 ADCY3O60266 1144 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 KRT38O76015 456 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 USP4Q13107 963 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 MAPK6Q16659 721 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 PPIL6Q8IXY8 311 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 EXD1Q8NHP7 514 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 ZFAND2BQ8WV99 257 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 KIFC3Q9BVG8 833 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 MEIS2O14770 477 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 CASQ2O14958 399 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 WEE2P0C1S8 567 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 STX3Q13277 289 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 LIN52Q52LA3 116 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 CGB2Q6NT52 195 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 SCYL2Q6P3W7 929 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 RINLQ6ZS11 566 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 SESTD1Q86VW0 696 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 HSPH1Q92598 858 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 CEP170P1Q96L14 293 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 TSNARE1Q96NA8 513 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 MCEEQ96PE7 176 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 VPS11Q9H270 941 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 GPRC5CQ9NQ84 441 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 PCMTD2Q9NV79 361 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 DDX18Q9NVP1 670 aaKnown RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 SHOC2Q9UQ13 582 aa9.47□□□□□ -0.89
CSMD1-212ENST00000523387 ATF5Q9Y2D1 282 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-212ENST00000523387 MYH3P11055 1940 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 CAMTA1Q9Y6Y1 1673 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 WDR64B1ANS9 1081 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 DNAJC6O75061 913 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 FKBP6O75344 327 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 TCEA3O75764 348 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 GM2AP17900 193 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 POLR2BP30876 1174 aaKnown RBP9.46□□□□□ -0.89
CSMD1-212ENST00000523387 QARSP47897 775 aaKnown RBP9.46□□□□□ -0.89
CSMD1-212ENST00000523387 CYLC2Q14093 348 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-212ENST00000523387 KRT81Q14533 505 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 EFTUD2Q15029 972 aaKnown RBP eCLIP9.46□□□□□ -0.89
CSMD1-212ENST00000523387 SMTNL2Q2TAL5 461 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 MFSD7Q6UXD7 560 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 TRIM72Q6ZMU5 477 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 TMEM179Q6ZVK1 233 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 ALYREFQ86V81 257 aaKnown RBP9.46□□□□□ -0.89
CSMD1-212ENST00000523387 C7orf43Q8WVR3 580 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 CLPTM1LQ96KA5 538 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 NMUR2Q9GZQ4 415 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 GALNT8Q9NY28 637 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 TAS2R1Q9NYW7 299 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 SLC9A2Q9UBY0 812 aa9.46□□□□□ -0.89
CSMD1-212ENST00000523387 CYP3A7-CYP3A51PA0A087WV96 503 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 CST8O60676 142 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 PGM3O95394 542 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 SLURP2P0DP57 97 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 CYP3A7P24462 503 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 ATP13A4Q4VNC1 1196 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 EFHC1Q5JVL4 640 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 SLC10A5Q5PT55 438 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 NXNQ6DKJ4 435 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 TTC7BQ86TV6 843 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 POU5F2Q8N7G0 328 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 FEZF2Q8TBJ5 459 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 SHC3Q92529 594 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 KREMEN1Q96MU8 473 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 UNC45AQ9H3U1 944 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 C10orf88Q9H8K7 445 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 ANLNQ9NQW6 1124 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 ATXN10Q9UBB4 475 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 COMMD3-BMI1R4GMX3 469 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 ECM29Q5VYK3 1845 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 AMPD1P23109 780 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
CSMD1-212ENST00000523387 CYTH1Q15438 398 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 SMAD1Q15797 465 aaKnown RBP9.46□□□□□ -0.9
CSMD1-212ENST00000523387 WDR60Q8WVS4 1066 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 KLHL4Q9C0H6 718 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 DTNAQ9Y4J8 743 aa9.46□□□□□ -0.9
CSMD1-212ENST00000523387 UMODL1Q5DID0 1318 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-212ENST00000523387 PDE5AO76074 875 aa9.45□□□□□ -0.9
CSMD1-212ENST00000523387 CLPTM1O96005 669 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms