RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 C11orf57Q6ZUT1 292 aaPredicted RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 KIAA0825Q8IV33 1275 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 POMGNT2Q8NAT1 580 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PJA1Q8NG27 643 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 WDR60Q8WVS4 1066 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PAGE5Q96GU1 130 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 MUC3BQ9H195 1237 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 KLHL11Q9NVR0 708 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PPP2R3BQ9Y5P8 575 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 HEATR9A2RTY3 570 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 NUDT2P50583 147 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 SCNN1DP51172 638 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 UBXN2AP68543 259 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ABRAXAS1Q6UWZ7 409 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 MRPL4Q9BYD3 311 aaKnown RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 KLHL1Q9NR64 748 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 A0A087X0T9 212 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 TRAPPC3O43617 180 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 VCLP18206 1134 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 GRIK1P39086 918 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 TWF1Q12792 350 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ARMCX6Q7L4S7 300 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ERP27Q96DN0 273 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ZNF560Q96MR9 790 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ARHGAP31Q2M1Z3 1444 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PNMA6FA0A0J9YX94 578 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 UBE2QL1A1L167 161 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 B2RBV5 119 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 PPP1R37O75864 691 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 SEC16BQ96JE7 1060 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 FAM49AQ9H0Q0 323 aaPredicted RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 ALG13Q9NP73 1137 aaKnown RBP12.91□□□□□ -0.34
EXTL3-214ENST00000523271 SIK3Q9Y2K2 1263 aa12.91□□□□□ -0.34
EXTL3-214ENST00000523271 TEX46H3BTG2 121 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 GPC1P35052 558 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 VAMP7P51809 220 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 RAD23AP54725 363 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 SGO1Q5FBB7 561 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 RASSF6Q6ZTQ3 369 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 ZFRQ96KR1 1074 aaKnown RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 BTBD3Q9Y2F9 522 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 A0A0X1KG70 313 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 LGALS16A8MUM7 142 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 ECE2O60344 883 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 CLYBLQ8N0X4 340 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 MARCOQ9UEW3 520 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 DGUOKQ16854 277 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 LRRC71Q8N4P6 559 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 PCMTD2Q9NV79 361 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 MGAT4AQ9UM21 535 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 SMIM22K7EJ46 135 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 NFX1Q12986 1120 aaKnown RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 SMCO1Q147U7 214 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 SNX17Q15036 470 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 ZNF284Q2VY69 593 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 LINC00523Q86TU6 105 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 MED15Q96RN5 788 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 IFNGR2P38484 337 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 KPNA1P52294 538 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 GPD1LQ8N335 351 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 SUCLG2Q96I99 432 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 MANSC1Q9H8J5 431 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 PRDM5Q9NQX1 630 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 NDUFB9Q9Y6M9 179 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 MZF1P28698 734 aaPredicted RBP12.9□□□□□ -0.34
EXTL3-214ENST00000523271 FBXW10Q5XX13 1052 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 RACGAP1Q9H0H5 632 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 NRDE2Q9H7Z3 1164 aa12.9□□□□□ -0.34
EXTL3-214ENST00000523271 TRIM49BA6NDI0 452 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 TRIM49D1C9J1S8 452 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 SCGNO76038 276 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 GMFBP60983 142 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 PTK7Q13308 1070 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 ZCCHC7Q8N3Z6 543 aaKnown RBP12.89□□□□□ -0.35
EXTL3-214ENST00000523271 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 C11orf70Q9BRQ4 267 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 UBN2Q6ZU65 1347 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 AGBL2Q5U5Z8 902 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 POLR1DQ9Y2S0 133 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 RBBP4Q09028 425 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 AGAP9Q5VTM2 703 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 IRAK1BP1Q5VVH5 260 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 PALB2Q86YC2 1186 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 CATSPERBQ9H7T0 1116 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 SLC52A2Q9HAB3 445 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 CPB1P15086 417 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 LPIN1Q14693 890 aa12.89□□□□□ -0.35
EXTL3-214ENST00000523271 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms