RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TTYH3Q9C0H2 523 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 UBE2TQ9NPD8 197 aaPredicted RBP12.76□□□□□ -0.37
PVT1-215ENST00000522963 CD207Q9UJ71 328 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 DNAJC12Q9UKB3 198 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 HCFC2Q9Y5Z7 792 aa12.76□□□□□ -0.37
PVT1-215ENST00000522963 TEX28O15482 410 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 ADH1AP07327 375 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 WEE2P0C1S8 567 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 SPATA31D3P0C874 917 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 P4HA1P13674 534 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 TRIM21P19474 475 aaKnown RBP12.75□□□□□ -0.37
PVT1-215ENST00000522963 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
PVT1-215ENST00000522963 CDC25BP30305 580 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 SCN1AP35498 2009 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 POLR2FP61218 127 aaKnown RBP12.75□□□□□ -0.37
PVT1-215ENST00000522963 GCNT1Q02742 428 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 PSMD5Q16401 504 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 WSCD1Q658N2 575 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 SPECC1LQ69YQ0 1117 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.75□□□□□ -0.37
PVT1-215ENST00000522963 SPATA31D4Q6ZUB0 917 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 TOP6BLQ8N6T0 577 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 UBR7Q8N806 425 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 CASP10Q92851 521 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
PVT1-215ENST00000522963 CYP3A43Q9HB55 503 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 NLRC4Q9NPP4 1024 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 CLEC1BQ9P126 229 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 FBXL5Q9UKA1 691 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 TIMM13Q9Y5L4 95 aaPredicted RBP12.75□□□□□ -0.37
PVT1-215ENST00000522963 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 COL6A3P12111 3177 aa12.75□□□□□ -0.37
PVT1-215ENST00000522963 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 RNF225M0QZC1 329 aaPredicted RBP12.74□□□□□ -0.37
PVT1-215ENST00000522963 HUS1O60921 280 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 LILRB3O75022 631 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 TACC1O75410 805 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 GYPCP04921 128 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 ODC1P11926 461 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 IL9P15248 144 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 ACO1P21399 889 aaKnown RBP12.74□□□□□ -0.37
PVT1-215ENST00000522963 RFX1P22670 979 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 TBXAS1P24557 533 aaPredicted RBP12.74□□□□□ -0.37
PVT1-215ENST00000522963 MFAP3P55082 362 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 ARPP19P56211 112 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 DRAP1Q14919 205 aaPredicted RBP12.74□□□□□ -0.37
PVT1-215ENST00000522963 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 ARHGAP44Q17R89 818 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 RARS2Q5T160 578 aaKnown RBP12.74□□□□□ -0.37
PVT1-215ENST00000522963 ANKRD54Q6NXT1 300 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 PPFIBP1Q86W92 1011 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 OSTM1Q86WC4 334 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 ADGRF2Q8IZF7 708 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 C12orf76Q8N812 135 aaPredicted RBP12.74□□□□□ -0.37
PVT1-215ENST00000522963 APPL2Q8NEU8 664 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 KBTBD7Q8WVZ9 684 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 BAP1Q92560 729 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 GPR88Q9GZN0 384 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.74□□□□□ -0.37
PVT1-215ENST00000522963 CISHQ9NSE2 258 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 CEP72Q9P209 647 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 DAAM1Q9Y4D1 1078 aa12.74□□□□□ -0.37
PVT1-215ENST00000522963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
PVT1-215ENST00000522963 A0A1W2PQJ5 194 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 SYN3O14994 580 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 GLUD1P00367 558 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 CYP11A1P05108 521 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 FAM163BP0C2L3 166 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 PNMA6AP0CW24 399 aaPredicted RBP12.73□□□□□ -0.37
PVT1-215ENST00000522963 BMP1P13497 986 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 CD58P19256 250 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 TYMPP19971 482 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 FGFR3P22607 806 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
PVT1-215ENST00000522963 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
PVT1-215ENST00000522963 RAPGEF1Q13905 1077 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 ENOSF1Q7L5Y1 443 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.73□□□□□ -0.37
PVT1-215ENST00000522963 LNX1Q8TBB1 728 aaPredicted RBP12.73□□□□□ -0.37
PVT1-215ENST00000522963 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 SLC22A17Q8WUG5 538 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 PIK3R5Q8WYR1 880 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 SHC3Q92529 594 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 FAM81BQ96LP2 452 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 NECAB3Q96P71 396 aaPredicted RBP12.73□□□□□ -0.37
PVT1-215ENST00000522963 STK33Q9BYT3 514 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 EDEM3Q9BZQ6 932 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 RXFP1Q9HBX9 757 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 NME7Q9Y5B8 376 aa12.73□□□□□ -0.37
PVT1-215ENST00000522963 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 GRXCR2A6NFK2 248 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 FOXN3O00409 490 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms