RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 A0A087X1B8 175 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 CENPVL1A0A0U1RR11 272 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 DRGXA6NNA5 263 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 SUV39H1O43463 412 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 NBNO60934 754 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 NDUFA10O95299 355 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 BRAFP15056 766 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 LAG3P18627 525 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 HALP42357 657 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 HSPA7P48741 367 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 CHN2P52757 468 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 INHBCP55103 352 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 RAP2BP61225 183 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 RPS16P62249 146 aaKnown RBP5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 TNFAIP2Q03169 654 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 ATXN7L2Q5T6C5 722 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 FAM102AQ5T9C2 384 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 TLDC1Q6P9B6 456 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 CYP2W1Q8TAV3 490 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 ZNF384Q8TF68 577 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 TMEM41AQ96HV5 264 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 NELL2Q99435 816 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 TTPALQ9BTX7 342 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 MRI1Q9BV20 369 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 STK33Q9BYT3 514 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 SLITRK6Q9H5Y7 841 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 PPCSQ9HAB8 311 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 AKIP1Q9NQ31 210 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 LUZP4Q9P127 313 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 CPA4Q9UI42 421 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 CDC23Q9UJX2 597 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 OGDHLQ9ULD0 1010 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 HS3ST4Q9Y661 456 aa5.71□□□□□ -1.5
HMGB1P1-201ENST00000522557 F5H423 210 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 RNASET2O00584 256 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 FOXN1O15353 648 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 PLA2G6O60733 806 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 SNRPA1P09661 255 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 PARP1P09874 1014 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 RAP2AP10114 183 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 RARBP10826 455 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 MTHFD1P11586 935 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 FGFR2P21802 821 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 MGAT1P26572 445 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 SMARCA1P28370 1054 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 GALNT1Q10472 559 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 ZRSR2Q15696 482 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 C3orf38Q5JPI3 329 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 LAIR1Q6GTX8 287 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 KCNV1Q6PIU1 500 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 LRRC55Q6ZSA7 311 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 MRGPRGQ86SM5 289 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 MYEOVQ96EZ4 313 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 AGO4Q9HCK5 861 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 ARFGAP3Q9NP61 516 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 GNL3LQ9NVN8 582 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 FBXO34Q9NWN3 711 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 ANKFY1Q9P2R3 1169 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 MAP3K2Q9Y2U5 619 aa5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 USP15Q9Y4E8 981 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 WDR33Q9C0J8 1336 aaKnown RBP5.7□□□□□ -1.5
HMGB1P1-201ENST00000522557 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 A0A087WZ62 844 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 CCDC189A1A4V9 331 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 MBD3L4A6NDZ8 208 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 MBD3L3A6NE82 208 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 E9PLN8 166 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 APOL1O14791 398 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 ADAMTS3O15072 1205 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 HAUS5O94927 633 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 ANXA1P04083 346 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 THP07101 528 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 ATP5JP18859 108 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 FSTL1Q12841 308 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 PTPAQ15257 358 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 LY6G5CQ5SRR4 150 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 KLHDC7AQ5VTJ3 777 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 PCSK4Q6UW60 755 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 MED25Q71SY5 747 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 LIX1LQ8IVB5 337 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 ATP11CQ8NB49 1132 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 MYRIPQ8NFW9 859 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 PRRX2Q99811 253 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 VKORC1Q9BQB6 163 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 SLC45A2Q9UMX9 530 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 PAXBP1Q9Y5B6 917 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 PCDHGB2Q9Y5G2 931 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 SNX13Q9Y5W8 968 aa5.69□□□□□ -1.5
HMGB1P1-201ENST00000522557 TMEM200CA6NKL6 621 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 DIRC3C9JPN6 131 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 BTN3A1O00481 513 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 RAMP2O60895 175 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 GJB1P08034 283 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 HARSP12081 509 aaKnown RBP5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 FDXRP22570 491 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 PDIA3P30101 505 aaKnown RBP5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 UBXN2BQ14CS0 331 aa5.68□□□□□ -1.5
HMGB1P1-201ENST00000522557 BEAN1Q3B7T3 259 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms