RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 HTRA4P83105 476 aaPredicted RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 FMO1Q01740 532 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 STILQ15468 1287 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 LRIT3Q3SXY7 679 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 RASIP1Q5U651 963 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 SLC4A11Q8NBS3 891 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 KIAA1524Q8TCG1 905 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 TMEM176AQ96HP8 235 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 YME1L1Q96TA2 773 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 ELOVL4Q9GZR5 314 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 CWH43Q9H720 699 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 LUC7LQ9NQ29 371 aaKnown RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 MARCH5Q9NX47 278 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 ADAM28Q9UKQ2 775 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 KIAA1257Q9ULG3 409 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 NENFQ9UMX5 172 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 FAN1Q9Y2M0 1017 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 PRG3Q9Y2Y8 225 aaPredicted RBP13.91□□□□□ -0.18
CPNE3-205ENST00000522240 KIAA1671Q9BY89 1806 aa13.91□□□□□ -0.18
CPNE3-205ENST00000522240 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.18
CPNE3-205ENST00000522240 DDX3XO00571 662 aaKnown RBP eCLIP13.9□□□□□ -0.18
CPNE3-205ENST00000522240 SYN3O14994 580 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 CCP110O43303 1012 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 THAP12O43422 761 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 MED7O43513 233 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 ALDH2P05091 517 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 ITGB1P05556 798 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 GALTP07902 379 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 CCDC175P0C221 793 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 VDRP11473 427 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 CHRNB2P17787 502 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 LAG3P18627 525 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 BRCC3P46736 316 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 BCAR1P56945 870 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 BTG3Q14201 252 aaPredicted RBP13.9□□□□□ -0.18
CPNE3-205ENST00000522240 C10orf76Q5T2E6 689 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 WSCD1Q658N2 575 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 PPP1R2P3Q6NXS1 205 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 TOGARAM2Q6ZUX3 1019 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 OSTM1Q86WC4 334 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 METTL23Q86XA0 190 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 PLPP6Q8IY26 295 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 TXLNBQ8N3L3 684 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 OR6B3Q8NGW1 331 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 LNX1Q8TBB1 728 aaPredicted RBP13.9□□□□□ -0.18
CPNE3-205ENST00000522240 SLC20A1Q8WUM9 679 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 TWNKQ96RR1 684 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 SPTLC3Q9NUV7 552 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 PCDHGC3Q9UN70 934 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 STXBP5LQ9Y2K9 1186 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 SLC4A7Q9Y6M7 1214 aa13.9□□□□□ -0.18
CPNE3-205ENST00000522240 A0A087X0T9 212 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 A8MXQ7 604 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 DLL1O00548 723 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 ZNF263O14978 683 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 TADA2AO75478 443 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 LSM8O95777 96 aaKnown RBP13.89□□□□□ -0.19
CPNE3-205ENST00000522240 MMEP08473 750 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 FAM228BP0C875 321 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 TNFAIP3P21580 790 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 IGFBP6P24592 240 aaPredicted RBP13.89□□□□□ -0.19
CPNE3-205ENST00000522240 PCSK1P29120 753 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 SPA17Q15506 151 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 FUT10Q6P4F1 479 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 GLYCTKQ8IVS8 523 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 HERC6Q8IVU3 1022 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 CRYBG2Q8N1P7 616 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 SP7Q8TDD2 431 aaPredicted RBP13.89□□□□□ -0.19
CPNE3-205ENST00000522240 HASPINQ8TF76 798 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 ZNF606Q8WXB4 792 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 LRCH3Q96II8 777 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPNE3-205ENST00000522240 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 CXXC1Q9P0U4 656 aaPredicted RBP13.89□□□□□ -0.19
CPNE3-205ENST00000522240 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 NAGPAQ9UK23 515 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 PPP2R2CQ9Y2T4 447 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 INSL6Q9Y581 213 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 NME7Q9Y5B8 376 aa13.89□□□□□ -0.19
CPNE3-205ENST00000522240 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
CPNE3-205ENST00000522240 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
CPNE3-205ENST00000522240 F8W810 466 aa13.88□□□□□ -0.19
CPNE3-205ENST00000522240 O00370 1275 aa13.88□□□□□ -0.19
CPNE3-205ENST00000522240 ZSCAN12O43309 604 aa13.88□□□□□ -0.19
CPNE3-205ENST00000522240 GZMAP12544 262 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms