RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
DENND3-217ENST00000521835 SUN1O94901 812 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
DENND3-217ENST00000521835 OVGP1Q12889 678 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 ENOSF1Q7L5Y1 443 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 UBA3Q8TBC4 463 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 TRIM11Q96F44 468 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 CAMKK2Q96RR4 588 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 PITPNM3Q9BZ71 974 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.83□□□□□ -0.36
DENND3-217ENST00000521835 DCTN4Q9UJW0 460 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
DENND3-217ENST00000521835 ATP8B3O60423 1300 aa12.83□□□□□ -0.36
DENND3-217ENST00000521835 MAPK13O15264 365 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 SNX3O60493 162 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 CST8O60676 142 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 PRKCBP05771 671 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 RFC1P35251 1148 aaPredicted RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 GDF10P55107 478 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 DENND1BQ6P3S1 775 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 FBXO16Q8IX29 292 aaPredicted RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 KCNV2Q8TDN2 545 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 TMEM237Q96Q45 408 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 CGRRF1Q99675 332 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 NTPCRQ9BSD7 190 aaKnown RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 METTL5Q9NRN9 209 aaKnown RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 A0A1W2PPM1 405 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 SLC1A1P43005 524 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 PSMC1P62191 440 aaKnown RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 EEF1DP3Q658K8 133 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 VSIG1Q86XK7 387 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 SCINQ9Y6U3 715 aa12.82□□□□□ -0.36
DENND3-217ENST00000521835 RBBP6Q7Z6E9 1792 aaKnown RBP12.82□□□□□ -0.36
DENND3-217ENST00000521835 C5orf60A6NFR6 353 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 CYP1A1P04798 512 aaPredicted RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 RGS7P49802 495 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 CCNHP51946 323 aaPredicted RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 ATP11AP98196 1134 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ZNF252P-AS1Q0IIN9 211 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 RAB6CQ53S08 254 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ARMCX6Q7L4S7 300 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 NETO2Q8NC67 525 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ACTL9Q8TC94 416 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 MAIP1Q8WWC4 291 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 RSAD2Q8WXG1 361 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 RAB6CQ9H0N0 254 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 SPATS2LQ9NUQ6 558 aaKnown RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 GPATCH2LQ9NWQ4 482 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 A0A0B4J269 797 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 SPATA31C2B4DYI2 1134 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 CDH16O75309 829 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 TJP3O95049 919 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 MYBL1P10243 752 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ATP5DP30049 168 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 NAMPTP43490 491 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 OTUD4Q01804 1114 aaKnown RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 MAPK6Q16659 721 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ANKRD22Q5VYY1 191 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 NPNTQ6UXI9 565 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 SPOCD1Q6ZMY3 1216 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 FAM71DQ8N9W8 422 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 KLHL23Q8NBE8 558 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ZNF483Q8TF39 744 aaPredicted RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 SERPINB12Q96P63 405 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 TRABDQ9H4I3 376 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 C17orf75Q9HAS0 396 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 IP6K2Q9UHH9 426 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 MYH9P35579 1960 aaKnown RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 RASSF9O75901 435 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 FOXN2P32314 431 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 TGFB2P61812 414 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 SNRPFP62306 86 aaKnown RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 MYO1EQ12965 1108 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 TFDP1Q14186 410 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 SH3PXD2AQ5TCZ1 1133 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 HHATQ5VTY9 493 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 C12orf50Q8NA57 414 aaPredicted RBP12.81□□□□□ -0.36
DENND3-217ENST00000521835 CPB2Q96IY4 423 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 FAM81BQ96LP2 452 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 KLHL14Q9P2G3 628 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 CHMP2BQ9UQN3 213 aa12.81□□□□□ -0.36
DENND3-217ENST00000521835 CHUKO15111 745 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 LIASO43766 372 aa12.8□□□□□ -0.36
DENND3-217ENST00000521835 AP1G2O75843 785 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms