RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 NRBP2Q9NSY0 501 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 MARCH5Q9NX47 278 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 CDH7Q9ULB5 785 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 ZMIZ1Q9ULJ6 1067 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 USP20Q9Y2K6 914 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 FRMD4BQ9Y2L6 1034 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 CEP295Q9C0D2 2601 aa11.7□□□□□ -0.54
MRPS28-208ENST00000521605 ATP8B3O60423 1300 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 A0A087WZ62 844 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 F8W810 466 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 USO1O60763 962 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 AKAP3O75969 853 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 RPL17P18621 184 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 PFKPQ01813 784 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 KCNH2Q12809 1159 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 SIM2Q14190 667 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 CSRP2Q16527 193 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 DNTTIP2Q5QJE6 756 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 AGMOQ6ZNB7 445 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 INTS8Q75QN2 995 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 FAM186BQ8IYM0 893 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 C17orf53Q8N3J3 647 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 TXLNBQ8N3L3 684 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 CELF5Q8N6W0 485 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 TMEM161BQ8NDZ6 487 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 NEK11Q8NG66 645 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 KIF18AQ8NI77 898 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 FGF13Q92913 245 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 CLDN23Q96B33 292 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 PGBD4Q96DM1 585 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 CEP89Q96ST8 783 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 TMEM175Q9BSA9 504 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 FAM126AQ9BYI3 521 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 PLEKHA4Q9H4M7 779 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 HEBP1Q9NRV9 189 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 ZDHHC7Q9NXF8 308 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 ARHGAP28Q9P2N2 729 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 NDRG2Q9UN36 371 aaKnown RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 ZFP37Q9Y6Q3 630 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-208ENST00000521605 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
MRPS28-208ENST00000521605 MYH9P35579 1960 aaKnown RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 WDR81Q562E7 1941 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 ARID2Q68CP9 1835 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 EIF3CLB5ME19 914 aaKnown RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 K7ENM7 598 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 PES1O00541 588 aaKnown RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 LRP3O75074 770 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 LCA5LO95447 670 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 PIGRP01833 764 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 GARTP22102 1010 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 NAMPTP43490 491 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 RPS9P46781 194 aaKnown RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 NPTX2P47972 431 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 RAB27AP51159 221 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 NRLP54845 237 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 KRT83P78385 493 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 SHC2P98077 582 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 KCNMA1Q12791 1236 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 SRSF5Q13243 272 aaKnown RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 TUBB2AQ13885 445 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 AASDHQ4L235 1098 aaPredicted RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 WDR59Q6PJI9 974 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 RSPO2Q6UXX9 243 aaPredicted RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 RAD9BQ6WBX8 426 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 ZNF852Q6ZMS4 543 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 CATSPER4Q7RTX7 472 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 USP37Q86T82 979 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 HDAC7Q8WUI4 952 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 BAP1Q92560 729 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 IFT74Q96LB3 600 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 NELL2Q99435 816 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 EIF3CQ99613 913 aaKnown RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 TUBB2BQ9BVA1 445 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 TRAIPQ9BWF2 469 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 RSAD1Q9HA92 442 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 RXFP1Q9HBX9 757 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 KIAA1586Q9HCI6 787 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 XPNPEP1Q9NQW7 623 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
MRPS28-208ENST00000521605 EPN1Q9Y6I3 576 aaPredicted RBP11.68□□□□□ -0.54
MRPS28-208ENST00000521605 MYH11P35749 1972 aa11.67□□□□□ -0.54
MRPS28-208ENST00000521605 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
MRPS28-208ENST00000521605 USP27XA6NNY8 438 aa11.67□□□□□ -0.54
MRPS28-208ENST00000521605 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
MRPS28-208ENST00000521605 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
MRPS28-208ENST00000521605 ZNF623O75123 536 aa11.67□□□□□ -0.54
MRPS28-208ENST00000521605 ZMYND10O75800 440 aa11.67□□□□□ -0.54
MRPS28-208ENST00000521605 NDUFA10O95299 355 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms