RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 USP32Q8NFA0 1604 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 PNPLA6Q8IY17 1366 aa4.13□□□□□ -1.75
VPS13B-209ENST00000521559 TNS3Q68CZ2 1445 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 NSD3Q9BZ95 1437 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 KIAA0391O15091 583 aaKnown RBP4.12□□□□□ -1.75
VPS13B-209ENST00000521559 XPOTO43592 962 aaKnown RBP4.12□□□□□ -1.75
VPS13B-209ENST00000521559 HAUS5O94927 633 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 AMY1AP04745 511 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 ELANEP08246 267 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 MYBL2P10244 700 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 SLC6A2P23975 617 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 CXCR5P32302 372 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 HSD11B2P80365 405 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 ATP8B2P98198 1209 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 RAB39AQ14964 217 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 DPY19L2P1Q6NXN4 242 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 MORC1Q86VD1 984 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 ARHGEF25Q86VW2 580 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 AOPEPQ8N6M6 819 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 KCNH5Q8NCM2 988 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 OR2I1PQ8NGU4 316 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 TBC1D15Q8TC07 691 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 CAGE1Q8TC20 777 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 ASB10Q8WXI3 467 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 JADE3Q92613 823 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 NELL1Q92832 810 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 MYOCQ99972 504 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 ZSWIM1Q9BR11 485 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 CASS4Q9NQ75 786 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 NEU2Q9Y3R4 380 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 SPEF1Q9Y4P9 236 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 INSL6Q9Y581 213 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 MAST3O60307 1309 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 USP19O94966 1318 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 NPC1L1Q9UHC9 1359 aa4.12□□□□□ -1.75
VPS13B-209ENST00000521559 ROBO1Q9Y6N7 1651 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 TCRBV7S2A1N4TA0A589 114 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 IARSP41252 1262 aaKnown RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 PABPC1LQ4VXU2 614 aaKnown RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 CC2D1BQ5T0F9 858 aaKnown RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 MEX3CQ5U5Q3 659 aaKnown RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 GADL1Q6ZQY3 521 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 GPR149Q86SP6 731 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 PNMA8AQ86V59 439 aaPredicted RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 CBARPQ8N350 705 aaPredicted RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 ZGPATQ8N5A5 531 aaKnown RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 MTMR8Q96EF0 704 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 TMX3Q96JJ7 454 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 Q96MF0 132 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 CALCOCO1Q9P1Z2 691 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.11□□□□□ -1.75
VPS13B-209ENST00000521559 TRHDEQ9UKU6 1024 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 NSD2O96028 1365 aa4.11□□□□□ -1.75
VPS13B-209ENST00000521559 KIF1AQ12756 1690 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 CDHR4A6H8M9 788 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 WNT10BO00744 389 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 KIAA0355O15063 1070 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 ORC4O43929 436 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 MT-CO1P00395 513 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 CCND1P24385 295 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 VAV2P52735 878 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 CYP2A13Q16696 494 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 PRR16Q569H4 304 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 SP5Q6BEB4 398 aaPredicted RBP4.1□□□□□ -1.75
VPS13B-209ENST00000521559 Q6ZNX1 250 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 PRIMA1Q86XR5 153 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 SLC44A3Q8N4M1 653 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 IL17RDQ8NFM7 739 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 IP6K1Q92551 441 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 PTCD3Q96EY7 689 aaKnown RBP4.1□□□□□ -1.75
VPS13B-209ENST00000521559 PACSIN1Q9BY11 444 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 PRDM11Q9NQV5 511 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 LRIT1Q9P2V4 623 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 POLKQ9UBT6 870 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 TUBD1Q9UJT1 453 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 PCDHA13Q9Y5I0 950 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 CFAP20Q9Y6A4 193 aaKnown RBP4.1□□□□□ -1.75
VPS13B-209ENST00000521559 CPDO75976 1380 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 OVOS2A0A0J9YW53 1432 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 OVOS2Q6IE36 1432 aa4.1□□□□□ -1.75
VPS13B-209ENST00000521559 COL16A1Q07092 1604 aaPredicted RBP4.1□□□□□ -1.75
VPS13B-209ENST00000521559 TRGV11A0A075B6L2 103 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 GRM6O15303 877 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 PRSS23O95084 383 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 ANXA1P04083 346 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 C5AR1P21730 350 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 MPLP40238 635 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 TNNT2P45379 298 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-209ENST00000521559 AMPHP49418 695 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 MTHFSP49914 203 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 ELLP55199 621 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-209ENST00000521559 ADKP55263 362 aaKnown RBP4.09□□□□□ -1.75
VPS13B-209ENST00000521559 EVA1CP58658 441 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 NOMO3P69849 1222 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 KIF23Q02241 960 aaPredicted RBP4.09□□□□□ -1.75
VPS13B-209ENST00000521559 ZNF844Q08AG5 666 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 FOXI1Q12951 378 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 MTMR1Q13613 665 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 RRS1Q15050 365 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms