RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 NLRC3Q7RTR2 1065 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 B3GNT8Q7Z7M8 397 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 LRRC47Q8N1G4 583 aaKnown RBP4.52□□□□□ -1.69
VPS13B-208ENST00000521037 Q8N1X5 172 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 SYNPOQ8N3V7 929 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 SDR42E1Q8WUS8 393 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 NKD1Q969G9 470 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 C16orf70Q9BSU1 422 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 MFSD1Q9H3U5 465 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 BCAS3Q9H6U6 928 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 AGO3Q9H9G7 860 aaKnown RBP4.52□□□□□ -1.69
VPS13B-208ENST00000521037 TBC1D17Q9HA65 648 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 PRMT8Q9NR22 394 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-208ENST00000521037 HOMER2Q9NSB8 354 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 ACTR10Q9NZ32 417 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 TELO2Q9Y4R8 837 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 PTPN13Q12923 2485 aa4.52□□□□□ -1.69
VPS13B-208ENST00000521037 EMSYQ7Z589 1322 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 TICRRQ7Z2Z1 1910 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 ESYT3A0FGR9 886 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 OVOL3O00110 214 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 MEIS1O00470 390 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 TNFRSF10CO14798 259 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 PDPK1O15530 556 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 KINO60870 393 aaKnown RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 S100BP04271 92 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 NCAM1P13591 858 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 HOXB8P17481 243 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 GIPRP48546 466 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 LIMK1P53667 647 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 STARD6P59095 220 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 BAATQ14032 418 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 LPIN1Q14693 890 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 LY6KQ17RY6 165 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 HLA-DQA1Q5Y7H0 255 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 KIAA1841Q6NSI8 718 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 TSSK4Q6SA08 328 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 CMTR2Q8IYT2 770 aaKnown RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 LCORLQ8N3X6 602 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 LILRB2Q8N423 598 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 SLC44A3Q8N4M1 653 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 TTC9BQ8N6N2 239 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 CELF2-AS1Q8N7Q2 184 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 PJA1Q8NG27 643 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 SLC22A17Q8WUG5 538 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 STAG1Q8WVM7 1258 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 NOX5Q96PH1 765 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 DNAJC7Q99615 494 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 CDCA3Q99618 268 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 CWH43Q9H720 699 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 KANSL2Q9H9L4 492 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 SEMA4GQ9NTN9 838 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 NYAP2Q9P242 653 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 NCDNQ9UBB6 729 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 DBNLQ9UJU6 430 aaKnown RBP4.51□□□□□ -1.69
VPS13B-208ENST00000521037 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 FAN1Q9Y2M0 1017 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 RWDD3Q9Y3V2 267 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 NR2E1Q9Y466 385 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 PCDHGA2Q9Y5H1 932 aa4.51□□□□□ -1.69
VPS13B-208ENST00000521037 LOC102724159A0A0B4J2E5 919 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 NKRFO15226 690 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 FGF10O15520 208 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 CLASP2O75122 1294 aaKnown RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 ZBED4O75132 1171 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 KCNK5O95279 499 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 FSHBP01225 129 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 PRB1P04280 392 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 GSNP06396 782 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 UQCRFS1P1P0C7P4 283 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 ZNF286BP0CG31 522 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 TXNP10599 105 aaKnown RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 IMPDH2P12268 514 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 PLA2G2AP14555 144 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 NME1P15531 152 aaKnown RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 THPOP40225 353 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 CLCQ05315 142 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 BTG3Q14201 252 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 PWP2Q15269 919 aaKnown RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 CSRP2Q16527 193 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 KIAA0753Q2KHM9 967 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 C2orf27AQ580R0 203 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 SPECC1Q5M775 1068 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 LRRC55Q6ZSA7 311 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 ZNF761Q86XN6 746 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 FAM169BQ8N8A8 192 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 THAP3Q8WTV1 239 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 SEPT8Q92599 483 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 CLDN23Q96B33 292 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 ZNF669Q96BR6 464 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 CCDC17Q96LX7 622 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 NEUROD6Q96NK8 337 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 NECTIN4Q96NY8 510 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 MEIS3Q99687 375 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 RPP25Q9BUL9 199 aaKnown RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 LSM14BQ9BX40 385 aaKnown RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 SCAND2PQ9GZW5 306 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-208ENST00000521037 SH2D4AQ9H788 454 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 CYP26B1Q9NR63 512 aa4.5□□□□□ -1.69
VPS13B-208ENST00000521037 ZSCAN32Q9NX65 697 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms