RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	NELFA	Q9H3P2	528 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ELAC1	Q9H777	363 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	CHODL	Q9H9P2	273 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	ZCCHC17	Q9NP64	241 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	SIDT1	Q9NXL6	827 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580		Q9UFV3	132 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	KCND3	Q9UK17	655 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	CROT	Q9UKG9	612 aa		4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	RBM8A	Q9Y5S9	174 aa	Known RBP	4.11	□□□□□ -1.75
SREK1-208	ENST00000520580	PI4KAP2	A4QPH2	592 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	C1QTNF9B	B2RNN3	333 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	STX16-NPEPL1	H3BU86	382 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	STX16	O14662	325 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PPP6R2	O75170	966 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	LMNA	P02545	664 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PNLIP	P16233	465 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	FST	P19883	344 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	MST1	P26927	711 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CCT4	P50991	539 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ALDH18A1	P54886	795 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	NAP1L1	P55209	391 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ACTR2	P61160	394 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ZNF827	Q17R98	1081 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	VWA3B	Q502W6	1294 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	C19orf54	Q5BKX5	351 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ATG16L1	Q676U5	607 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ZC3H14	Q6PJT7	736 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC22A25	Q6T423	547 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	GET4	Q7L5D6	327 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	SYT13	Q7L8C5	426 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	TAS1R1	Q7RTX1	841 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CEP95	Q96GE4	821 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	TWNK	Q96RR1	684 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	DDX23	Q9BUQ8	820 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	GHITM	Q9H3K2	345 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	C19orf73	Q9NVV2	129 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	HSPBP1	Q9NZL4	362 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	VPS28	Q9UK41	221 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	MBD3L3	A6NE82	208 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	AP3D1	O14617	1153 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PCDH17	O14917	1159 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	VPS4B	O75351	444 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	TGFB1	P01137	390 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	TK1	P04183	234 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	MPO	P05164	745 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	MYCL	P12524	364 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CPA1	P15085	419 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	TPH1	P17752	444 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ACVR2A	P27037	513 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CRHR1	P34998	444 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	GGT5	P36269	586 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CASR	P41180	1078 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	STAT1	P42224	750 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PTDSS1	P48651	473 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CLNS1A	P54105	237 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	POU6F2	P78424	691 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	DUSP2	Q05923	314 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	GRM4	Q14833	912 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PLCB4	Q15147	1175 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PABPC1L	Q4VXU2	614 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	MAP3K21	Q5TCX8	1036 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	FAM47E	Q6ZV65	393 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ZDHHC13	Q8IUH4	622 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	SIAH1	Q8IUQ4	282 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	TSPYL6	Q8N831	410 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ZNF775	Q96BV0	537 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	GRAMD1A	Q96CP6	724 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	RNF125	Q96EQ8	232 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	C7orf26	Q96N11	449 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PACSIN1	Q9BY11	444 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	CCDC68	Q9H2F9	335 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	NKIRAS2	Q9NYR9	191 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ADD3	Q9UEY8	706 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	GIMAP2	Q9UG22	337 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	ADAMTS8	Q9UP79	889 aa		4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	RRP7A	Q9Y3A4	280 aa	Known RBP	4.1	□□□□□ -1.75
SREK1-208	ENST00000520580	PRR19	A6NJB7	356 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	TOX4	O94842	621 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	KIF20A	O95235	890 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	PRKCB	P05771	671 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	KCNC1	P48547	511 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	CPT1A	P50416	773 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	ATP2B3	Q16720	1220 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	PLA1A	Q53H76	456 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	PLAG1	Q6DJT9	500 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	RINT1	Q6NUQ1	792 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	SYNE3	Q6ZMZ3	975 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	FAM46D	Q8NEK8	389 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	OR6Y1	Q8NGX8	325 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	SLC35B2	Q8TB61	432 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	MYLIP	Q8WY64	445 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	RADIL	Q96JH8	1075 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	TMEM8A	Q9HCN3	771 aa		4.09	□□□□□ -1.75
SREK1-208	ENST00000520580	CEP72	Q9P209	647 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms