RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 VMP1Q96GC9 406 aa10.61□□□□□ -0.71
PDGFRB-207ENST00000520579 ACAP3Q96P50 834 aa10.61□□□□□ -0.71
PDGFRB-207ENST00000520579 TSSK1BQ9BXA7 367 aa10.61□□□□□ -0.71
PDGFRB-207ENST00000520579 SPATA16Q9BXB7 569 aa10.61□□□□□ -0.71
PDGFRB-207ENST00000520579 STK33Q9BYT3 514 aa10.61□□□□□ -0.71
PDGFRB-207ENST00000520579 TEX28O15482 410 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ATP5HO75947 161 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 MAP3K6O95382 1288 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 VAV1P15498 845 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 PDE1BQ01064 536 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 PPP2R5EQ16537 467 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 SHROOM1Q2M3G4 852 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 RBM44Q6ZP01 1051 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 FRMD5Q7Z6J6 570 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 C10orf82Q8WW14 230 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 LENG1Q96BZ8 264 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ROPN1BQ9BZX4 212 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ROPN1Q9HAT0 212 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ITGB1BP2Q9UKP3 347 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 NEU2Q9Y3R4 380 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 IKBKGQ9Y6K9 419 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 A0A1W2PQ67 120 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ADCY3O60266 1144 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ARSEP51690 589 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 DSG1Q02413 1049 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 UBAP2LQ14157 1087 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 HSPBAP1Q96EW2 488 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 SNX27Q96L92 541 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 CNBD2Q96M20 576 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 C11orf70Q9BRQ4 267 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 INIPQ9NRY2 104 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 LRRC4BQ9NT99 713 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 BTBD7Q9P203 1132 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ANKFY1Q9P2R3 1169 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 PCDHA1Q9Y5I3 950 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 TNS3Q68CZ2 1445 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 CES2O00748 559 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 XPO1O14980 1071 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ZBTB48P10074 688 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 CYP19A1P11511 503 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 BTDP43251 543 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ARL4CP56559 192 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ZBTB17Q13105 803 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 TFDP1Q14186 410 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 RASA2Q15283 850 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 PARP6Q2NL67 630 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 PRPF39Q86UA1 669 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 APEX2Q9UBZ4 518 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 ANGPTL2Q9UKU9 493 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 RABGAP1Q9Y3P9 1069 aa10.6□□□□□ -0.71
PDGFRB-207ENST00000520579 TFPTP0C1Z6 253 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ANPEPP15144 967 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 HSPA1LP34931 641 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PRKG1Q13976 671 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 NOP9Q86U38 636 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 C11orf74Q86VG3 221 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 CCDC134Q9H6E4 229 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ACSS2Q9NR19 701 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ASTN1O14525 1302 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 NID2Q14112 1375 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MGEA5O60502 916 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ITGA2BP08514 1039 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 AKR1B1P15121 316 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MAPK10P53779 464 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 YARSP54577 528 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 YWHAGP61981 247 aaKnown RBP eCLIP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PTK7Q13308 1070 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MED21Q13503 144 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TMEM119Q4V9L6 283 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 RHOT2Q8IXI1 618 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 FAM136AQ96C01 138 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 KLHL4Q9C0H6 718 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 METTL14Q9HCE5 456 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PALMDQ9NP74 551 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TRPV5Q9NQA5 729 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PDP2Q9P2J9 529 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PCP4L1A6NKN8 68 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 CFLARO15519 480 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ASMTLO95671 621 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 GSTA2P09210 222 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PDGFRBP09619 1106 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 CACNB3P54284 484 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TMPRSS15P98073 1019 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 ARHGAP4P98171 946 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TCP10Q12799 353 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 DLG1Q12959 904 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 BRINP3Q76B58 766 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 PALM2Q8IXS6 379 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 GRAMD1AQ96CP6 724 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TYW1Q9NV66 732 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 LMTK3Q96Q04 1460 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 A0A0J9YVX5 310 aa10.59□□□□□ -0.71
PDGFRB-207ENST00000520579 TMEM150BA6NC51 233 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms