RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 NDST1P52848 882 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 GNG11P61952 73 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 DEFB103AP81534 67 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.962e-6■■□□□ 12
VAPB-206ENST00000520497 TUBB2AQ13885 445 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 IFI16Q16666 785 aaKnown RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 C9orf50Q5SZB4 431 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 CCDC122Q5T0U0 273 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 C16orf59Q7L2K0 433 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 UNC93AQ86WB7 457 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PDCL2Q8N4E4 241 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 DEFB123Q8N688 67 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 APPL2Q8NEU8 664 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 SPATA18Q8TC71 538 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 ATRIPQ8WXE1 791 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 TFAP2BQ92481 460 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 TOP1MTQ969P6 601 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 ZNF689Q96CS4 500 aaPredicted RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 FAM161BQ96MY7 647 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 ALS2CR12Q96Q35 445 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 MMS19Q96T76 1030 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PCDHB18PQ96TA0 734 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 MRPL45Q9BRJ2 306 aaKnown RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 TUBB2BQ9BVA1 445 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 MRPL9Q9BYD2 267 aaKnown RBP9.08□□□□□ -0.96
VAPB-206ENST00000520497 ELOVL4Q9GZR5 314 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 NRDE2Q9H7Z3 1164 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 LZTFL1Q9NQ48 299 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 DNAJB4Q9UDY4 337 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PRKAG2Q9UGJ0 569 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PCDHA13Q9Y5I0 950 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 MYO7AQ13402 2215 aa9.08□□□□□ -0.96
VAPB-206ENST00000520497 PLXNA3P51805 1871 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 CTAGE9A4FU28 777 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TBKBP1A7MCY6 615 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 F8W810 466 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 CYB561D2O14569 222 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 HUS1O60921 280 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 B3GAT3O94766 335 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 AMHP03971 560 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 CYP1A1P04798 512 aaPredicted RBP9.07□□□□□ -0.96
VAPB-206ENST00000520497 CYP11A1P05108 521 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 ACRP10323 421 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 GZMAP12544 262 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TNFAIP3P21580 790 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 BRD2P25440 801 aaKnown RBP9.07□□□□□ -0.96
VAPB-206ENST00000520497 ARHGAP25P42331 645 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 MAGEA1P43355 309 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 BRCC3P46736 316 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 EPHB4P54760 987 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 RNASELQ05823 741 aaKnown RBP9.07□□□□□ -0.96
VAPB-206ENST00000520497 FPGSQ05932 587 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TIGD5Q53EQ6 642 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 ZNF394Q53GI3 561 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TAF3Q5VWG9 929 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 PPP1R2P3Q6NXS1 205 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 DCLRE1AQ6PJP8 1040 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 OSTM1Q86WC4 334 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 ADGRF2Q8IZF7 708 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 ABI1Q8IZP0 508 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TMEM86AQ8N2M4 240 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 LRRC43Q8N309 656 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 ZNF606Q8WXB4 792 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 RABGGTAQ92696 567 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 BADQ92934 168 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TMEM176AQ96HP8 235 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 SUSD3Q96L08 255 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 TMEM175Q9BSA9 504 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 NT5C1AQ9BXI3 368 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 LACRTQ9GZZ8 138 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 ISCUQ9H1K1 167 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 DNAI1Q9UI46 699 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 INTUQ9ULD6 942 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 PCDHGC3Q9UN70 934 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 STXBP5LQ9Y2K9 1186 aa9.07□□□□□ -0.96
VAPB-206ENST00000520497 LAMA3Q16787 3333 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 OBSL1O75147 1896 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 BTNL10A8MVZ5 291 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 THAP12O43422 761 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 RTN2O75298 545 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 ABL1P00519 1130 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 CFHP08603 1231 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 ODC1P11926 461 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 UNGP13051 313 aaPredicted RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 TYMPP19971 482 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 CDH5P33151 784 aaPredicted RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 NOMO3P69849 1222 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 CENPCQ03188 943 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 ORC1Q13415 861 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 SHHQ15465 462 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 CLEC16AQ2KHT3 1053 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 LRIT3Q3SXY7 679 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 PAN2Q504Q3 1202 aaKnown RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 TMEM240Q5SV17 173 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 WSCD1Q658N2 575 aa9.06□□□□□ -0.96
VAPB-206ENST00000520497 ASTLQ6HA08 431 aaPredicted RBP9.06□□□□□ -0.96
VAPB-206ENST00000520497 PSRC1Q6PGN9 363 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms