RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TMED8Q6PL24 325 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 RFX8Q6ZV50 586 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 TEX19Q8NA77 164 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 ATG16L2Q8NAA4 619 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 GLIS1Q8NBF1 620 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 RNF169Q8NCN4 708 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 PDPRQ8NCN5 879 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 FAM46DQ8NEK8 389 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 MDGA1Q8NFP4 955 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 SMCR8Q8TEV9 937 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 EID2BQ96D98 161 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 MESP1Q9BRJ9 268 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 SPON1Q9HCB6 807 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 ZSCAN32Q9NX65 697 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 GRHPRQ9UBQ7 328 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 HDAC9Q9UKV0 1011 aa6.28□□□□□ -1.4
HMGB1P46-201ENST00000520062 A0A087WZ62 844 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 DRGXA6NNA5 263 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 KIF20AO95235 890 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 NDST3O95803 873 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 ITGB1P05556 798 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 ITGA5P08648 1049 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 CPT1AP50416 773 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 SLFN5Q08AF3 891 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 ARHGEF7Q14155 803 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 RRAGBQ5VZM2 374 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 MCTP1Q6DN14 999 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 TANGO2Q6ICL3 276 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 MMS22LQ6ZRQ5 1243 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 MED25Q71SY5 747 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZFPM1Q8IX07 1006 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 LRRC37BQ96QE4 947 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 REXO4Q9GZR2 422 aaKnown RBP6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 MEGF9Q9H1U4 602 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 FAM83DQ9H4H8 585 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 TBC1D23Q9NUY8 699 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 ETAA1Q9NY74 926 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 PLA2G3Q9NZ20 509 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 C9orf78Q9NZ63 289 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 POGKQ9P215 609 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 LRFN1Q9P244 771 aa6.27□□□□□ -1.41
HMGB1P46-201ENST00000520062 NPIPB6E9PJ23 425 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 NUAK1O60285 661 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 EGR1P18146 543 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 RAP1GAPP47736 663 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 ITGA8P53708 1063 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 POLE2P56282 527 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 SATB1Q01826 763 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 IQCB1Q15051 598 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 MAPKAPK3Q16644 382 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 VMACQ2NL98 169 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZDHHC24Q6UX98 284 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 SP8Q8IXZ3 490 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 CFAP52Q8N1V2 620 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 GALNT15Q8N3T1 639 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 SMOQ99835 787 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 GJD2Q9UKL4 321 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 SHOC2Q9UQ13 582 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 LRRFIP2Q9Y608 721 aaKnown RBP6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 SLC30A1Q9Y6M5 507 aa6.26□□□□□ -1.41
HMGB1P46-201ENST00000520062 AQP7P3A6NL99 342 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 IRAK2O43187 625 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 LAMTOR5O43504 91 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 EIF5BO60841 1220 aaKnown RBP6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 ATXN1LP0C7T5 689 aaKnown RBP6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 FCER1AP12319 257 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 CHN2P52757 468 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 ELAVL1Q15717 326 aaKnown RBP6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 NPY5RQ15761 445 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 NOMO2Q5JPE7 1267 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 NT5DC1Q5TFE4 455 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 PLAG1Q6DJT9 500 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 FCRL6Q6DN72 434 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 CYP26C1Q6V0L0 522 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 KIAA0408Q6ZU52 694 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 TAX1BP1Q86VP1 789 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 POU5F2Q8N7G0 328 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 IL17REQ8NFR9 667 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 IPO4Q8TEX9 1081 aaKnown RBP6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 RAPGEF4Q8WZA2 1011 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 TMEM176AQ96HP8 235 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 IGSF9Q9P2J2 1179 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 DKK4Q9UBT3 224 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 PNMA2Q9UL42 364 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 CA14Q9ULX7 337 aa6.25□□□□□ -1.41
HMGB1P46-201ENST00000520062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 AQP12BA6NM10 295 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 RAB27BO00194 218 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 POLRMTO00411 1230 aaKnown RBP6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 TRIM13O60858 407 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 SOAT2O75908 522 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 RAD17O75943 681 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 GLP2RO95838 553 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 TPH1P17752 444 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 ZNF844Q08AG5 666 aa6.24□□□□□ -1.41
HMGB1P46-201ENST00000520062 POSTNQ15063 836 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms