RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 ISCUQ9H1K1 167 aa8.5□□□□□ -1.05
CLK4-203ENST00000519583 RSAD1Q9HA92 442 aa8.5□□□□□ -1.05
CLK4-203ENST00000519583 RAB21Q9UL25 225 aa8.5□□□□□ -1.05
CLK4-203ENST00000519583 TNFSF13BQ9Y275 285 aa8.5□□□□□ -1.05
CLK4-203ENST00000519583 KCNK3O14649 394 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 CUL2Q13617 745 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 BRD3Q15059 726 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 AGMOQ6ZNB7 445 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 MRPL10Q7Z7H8 261 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 SLFN11Q7Z7L1 901 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 WDR49Q8IV35 697 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 DDX1Q92499 740 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 CASD1Q96PB1 797 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 TGS1Q96RS0 853 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 C17orf80Q9BSJ5 609 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 CDT1Q9H211 546 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 RNF39Q9H2S5 420 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 HCSTQ9UBK5 93 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 PARP2Q9UGN5 583 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 COG5Q9UP83 839 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 NUB1Q9Y5A7 615 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 MRPL42Q9Y6G3 142 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 CCDC151A5D8V7 595 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 ATMINO43313 823 aaPredicted RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 RTN2O75298 545 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 ZRANB2O95218 330 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLK4-203ENST00000519583 CLTAP09496 248 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 AKAP5P24588 427 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 RNASE9P60153 205 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 GRIN2CQ14957 1233 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 DCAF4L1Q3SXM0 396 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 CFAP221Q4G0U5 840 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 APBB1IPQ7Z5R6 666 aaPredicted RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 SYCE1Q8N0S2 351 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 FAM81BQ96LP2 452 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 ARFGAP3Q9NP61 516 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 SNTG2Q9NY99 539 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 GZMAP12544 262 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 ACO1P21399 889 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 CTNNB1P35222 781 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 MRPS25P82663 173 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 TFAMQ00059 246 aaKnown RBP8.49□□□□□ -1.05
CLK4-203ENST00000519583 NT5DC3Q86UY8 548 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 TMEM192Q8IY95 271 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 PRDM12Q9H4Q4 367 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 KLK14Q9P0G3 267 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 CTTNBP2NLQ9P2B4 639 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 STXBP5LQ9Y2K9 1186 aa8.49□□□□□ -1.05
CLK4-203ENST00000519583 RFXAPO00287 272 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ZMYND10O75800 440 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 CST3P01034 146 aaPredicted RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 CXCL8P10145 99 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 MLH1P40692 756 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ERVK-21P61565 698 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 GPC5P78333 572 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ITIH3Q06033 890 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 NOMO2Q5JPE7 1267 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 EFCAB13Q8IY85 973 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 LRRC43Q8N309 656 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 MMGT1Q8N4V1 131 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 URGCPQ8TCY9 931 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 GAD1Q99259 594 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 RBM12Q9NTZ6 932 aaKnown RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 PCDHB4Q9Y5E5 795 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 SZT2Q5T011 3432 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 AFF1P51825 1210 aaKnown RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 AP3M2P53677 418 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 MYL6P60660 151 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 RNASELQ05823 741 aaKnown RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 DUOXA2Q1HG44 320 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 TMEM270Q6UE05 265 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 RHOT2Q8IXI1 618 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 FBXO22Q8NEZ5 403 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 MRPL9Q9BYD2 267 aaKnown RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 IMPG2Q9BZV3 1241 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 UBN1Q9NPG3 1134 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 MTMR10Q9NXD2 777 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 RNF14Q9UBS8 474 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 AMFRQ9UKV5 643 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 GIT1Q9Y2X7 761 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 COL4A6Q14031 1691 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 EPOPA6NHQ4 379 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 CEP104O60308 925 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 RECQL4O94761 1208 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ASS1P00966 412 aaKnown RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 SURF1Q15526 300 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 LONRF2Q1L5Z9 754 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 CLEC16AQ2KHT3 1053 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 HINFPQ9BQA5 517 aa8.48□□□□□ -1.05
CLK4-203ENST00000519583 RPF1Q9H9Y2 349 aaKnown RBP8.48□□□□□ -1.05
CLK4-203ENST00000519583 FNDC1Q4ZHG4 1894 aaPredicted RBP8.47□□□□□ -1.05
CLK4-203ENST00000519583 TMEM110-MUSTN1A8MSY1 372 aa8.47□□□□□ -1.05
CLK4-203ENST00000519583 POMCP01189 267 aa8.47□□□□□ -1.05
CLK4-203ENST00000519583 TMEM191BP0C7N4 346 aa8.47□□□□□ -1.05
CLK4-203ENST00000519583 MCF2P10911 925 aa8.47□□□□□ -1.05
CLK4-203ENST00000519583 TBXAS1P24557 533 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms