RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SUSD3Q96L08 255 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 DNAJC7Q99615 494 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 TTYH3Q9C0H2 523 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 RXFP1Q9HBX9 757 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 MAN1C1Q9NR34 630 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SSX2IPQ9Y2D8 614 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 SIK3Q9Y2K2 1263 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 ZKSCAN5Q9Y2L8 839 aa8.15□□□□□ -1.1
SDCBP-206ENST00000519115 USP15Q9Y4E8 981 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 TIMM13Q9Y5L4 95 aaPredicted RBP8.15□□□□□ -1.1
SDCBP-206ENST00000519115 ANO9A1A5B4 782 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF500O60304 480 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 ITGB3P05106 788 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TMEM191BP0C7N4 346 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CCDC172P0C7W6 258 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TRIM21P19474 475 aaKnown RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 POLR2BP30876 1174 aaKnown RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 OR1D2P34982 312 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 AARSP49588 968 aaKnown RBP eCLIP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CASP4P49662 377 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 VAMP7P51809 220 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 LILRA4P59901 499 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CREMQ03060 361 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CYP24A1Q07973 514 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 PSMD6Q15008 389 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 MEA1Q16626 185 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CEP135Q66GS9 1140 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 RSPO2Q6UXX9 243 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TMC5Q6UXY8 1006 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 DSTYKQ6XUX3 929 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TMEM184AQ6ZMB5 413 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 ENOSF1Q7L5Y1 443 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 C1orf127Q8N9H9 656 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TC2NQ8N9U0 490 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 OR5B17Q8NGF7 314 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TAF4BQ92750 862 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 SENP8Q96LD8 212 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 POP1Q99575 1024 aaKnown RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CLSTN3Q9BQT9 956 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 COL25A1Q9BXS0 654 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 DZANK1Q9NVP4 752 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 ZNHIT6Q9NWK9 470 aaKnown RBP8.14□□□□□ -1.11
SDCBP-206ENST00000519115 TAB2Q9NYJ8 693 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 AIPL1Q9NZN9 384 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CEP72Q9P209 647 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 FNIP2Q9P278 1114 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 MTRRQ9UBK8 725 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 SIX4Q9UIU6 781 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 CDY1Q9Y6F8 540 aa8.14□□□□□ -1.11
SDCBP-206ENST00000519115 NOTCH4Q99466 2003 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 MYH10P35580 1976 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 GOLGA6L9A6NEM1 432 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 M0QZQ0 153 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 PIRO00625 290 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 SYN3O14994 580 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 TGM5O43548 720 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 MFAP3LO75121 409 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 RFPL2O75678 378 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 GFPT2O94808 682 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 TNNC2P02585 160 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 KRT19P08727 400 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 TNNI1P19237 187 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 SP100P23497 879 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-206ENST00000519115 FMO5P49326 533 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 TAF6P49848 677 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 CDR1P51861 262 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 ARPP19P56211 112 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 KCNMA1Q12791 1236 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 SYCP1Q15431 976 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 SMAD2Q15796 467 aaKnown RBP8.13□□□□□ -1.11
SDCBP-206ENST00000519115 CTXN3Q4LDR2 81 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 KRT39Q6A163 491 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF280DQ6N043 979 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 PDXDC1Q6P996 788 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF662Q6ZS27 426 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 ANKS3Q6ZW76 656 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 GPR65Q8IYL9 337 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 TXLNBQ8N3L3 684 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 KREMEN2Q8NCW0 462 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 EHBP1Q8NDI1 1231 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 NEK11Q8NG66 645 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 PLEKHO2Q8TD55 490 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 CACTINQ8WUQ7 758 aaKnown RBP8.13□□□□□ -1.11
SDCBP-206ENST00000519115 EEF2KMTQ96G04 330 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 ANKRD36BP1Q96IX9 119 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 ZNF560Q96MR9 790 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 FNBP1Q96RU3 617 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 UHRF1Q96T88 793 aaPredicted RBP8.13□□□□□ -1.11
SDCBP-206ENST00000519115 CGRRF1Q99675 332 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 S1PR5Q9H228 398 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 SFXN1Q9H9B4 322 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 TMEM8AQ9HCN3 771 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 FBXW11Q9UKB1 542 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 AGAP1Q9UPQ3 857 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 FAM50BQ9Y247 325 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 VCANP13611 3396 aa8.13□□□□□ -1.11
SDCBP-206ENST00000519115 PTPRDP23468 1912 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 SSU72P8A0A1W2PR75 194 aa8.12□□□□□ -1.11
SDCBP-206ENST00000519115 WDR27A2RRH5 827 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms