RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 PAWRQ96IZ0 340 aaKnown RBP3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PNKPQ96T60 521 aa3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 UHRF1Q96T88 793 aaPredicted RBP3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TMEM260Q9NX78 707 aa3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SIK3Q9Y2K2 1263 aa3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CD2APQ9Y5K6 639 aa3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PPP2R3BQ9Y5P8 575 aa3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 KIAA0232Q92628 1395 aa3.89□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SSH2Q76I76 1423 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 LCHNA4D1U4 455 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ERVV-2B6SEH9 535 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ADM5C9JUS6 153 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 GCOM1H8Y6P7 765 aaPredicted RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 EXOC5O00471 708 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SRGNP10124 158 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ALOX15P16050 662 aaPredicted RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ADSLP30566 484 aaPredicted RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 NR4A2P43354 598 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PABPC4Q13310 644 aaKnown RBP eCLIP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TRIM25Q14258 630 aaKnown RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 GPR158Q5T848 1215 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ZNF529Q6P280 563 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SLC2A7Q6PXP3 512 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TSHZ1Q6ZSZ6 1077 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 KCNH5Q8NCM2 988 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SREK1Q8WXA9 508 aaKnown RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TMEM125Q96AQ2 219 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 MED15Q96RN5 788 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SH2D3AQ9BRG2 576 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 QTRT1Q9BXR0 403 aaKnown RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SPRTNQ9H040 489 aaPredicted RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 WNT8AQ9H1J5 351 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 THG1LQ9NWX6 298 aaKnown RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 MOCS1Q9NZB8 636 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 STK26Q9P289 416 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TMPRSS11EQ9UL52 423 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 RGPD3A6NKT7 1758 aaPredicted RBP3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 RGPD4Q7Z3J3 1758 aa3.88□□□□□ -1.79
ATP6V1C1-204ENST00000518959 E9PCH4 1651 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CAMTA1Q9Y6Y1 1673 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PIK3C2GO75747 1445 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PPP6CO00743 305 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 AKR1B10O60218 316 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ASMTLO95671 621 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TOP3BO95985 862 aaKnown RBP3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CYP2D6P10635 497 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SP140Q13342 867 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 MST1LQ2TV78 715 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SUPT20HL1Q3ZLR7 823 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PITRM1Q5JRX3 1037 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PXDC1Q5TGL8 231 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 DLK2Q6UY11 383 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 LYSMD2Q8IV50 215 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 DNAJC5GQ8N7S2 189 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 SLC30A5Q8TAD4 765 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CHTF18Q8WVB6 975 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 MRFAP1L1Q96HT8 127 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PGBD1Q96JS3 809 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PRAM1Q96QH2 718 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 INTS13Q9NVM9 706 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 USP35Q9P2H5 1018 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 HSFX1Q9UBD0 423 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 MAGEC2Q9UBF1 373 aaPredicted RBP3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CDY2AQ9Y6F7 541 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CCDC7Q96M83 1385 aa3.87□□□□□ -1.79
ATP6V1C1-204ENST00000518959 LATS1O95835 1130 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 F2P00734 622 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 IL2RBP14784 551 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 LSP1P33241 339 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 KPNA1P52294 538 aaPredicted RBP3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ZNF134P52741 427 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 MANFP55145 182 aaKnown RBP3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 DSG1Q02413 1049 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PTPRRQ15256 657 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 RABEP1Q15276 862 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ZNF66Q6ZN08 573 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 KIF18BQ86Y91 864 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 C16orf71Q8IYS4 520 aaPredicted RBP3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 NXPE1Q8N323 547 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 OR7D4Q8NG98 312 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 STON2Q8WXE9 905 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 VPS16Q9H269 839 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ZSWIM4Q9H7M6 989 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 FBXO34Q9NWN3 711 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TUBA8Q9NY65 449 aaPredicted RBP3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PCDHB1Q9Y5F3 818 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PLCH1Q4KWH8 1693 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 RREB1Q92766 1687 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 USP19O94966 1318 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 WDR17Q8IZU2 1322 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TNS1Q9HBL0 1735 aaKnown RBP3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 POLR3AO14802 1390 aaPredicted RBP3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ATRNL1Q5VV63 1379 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 NSD3Q9BZ95 1437 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 ATP10DQ9P241 1426 aa3.86□□□□□ -1.79
ATP6V1C1-204ENST00000518959 NRKQ7Z2Y5 1582 aa3.85□□□□□ -1.79
ATP6V1C1-204ENST00000518959 CLTCL1P53675 1640 aa3.85□□□□□ -1.79
ATP6V1C1-204ENST00000518959 PROM1O43490 865 aa3.85□□□□□ -1.79
ATP6V1C1-204ENST00000518959 TGM5O43548 720 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms