RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 LPIN3Q9BQK8 851 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 CES2O00748 559 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 MICAL2O94851 1124 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 RPS6KC1Q96S38 1066 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 RNF14Q9UBS8 474 aa24.79■■□□□ 1.56
SLIT3-204ENST00000518140 PDCD11Q14690 1871 aaKnown RBP24.79■■□□□ 1.56
SLIT3-204ENST00000518140 ZNF211Q13398 564 aaPredicted RBP24.78■■□□□ 1.56
SLIT3-204ENST00000518140 MBTPS1Q14703 1052 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 MTFR1Q15390 333 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 CYP4A22Q5TCH4 519 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 DAB2IPQ5VWQ8 1189 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 AADACL2Q6P093 401 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 MSANTD4Q8NCY6 345 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 ADAM2Q99965 735 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 HINFPQ9BQA5 517 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 NT5C1AQ9BXI3 368 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 LHX5Q9H2C1 402 aa24.78■■□□□ 1.56
SLIT3-204ENST00000518140 ARL5CA6NH57 179 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 KPNA7A9QM74 516 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 O00370 1275 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 MED7O43513 233 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 FGFR1P11362 822 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 SMYD5Q6GMV2 418 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 MRPL10Q7Z7H8 261 aaKnown RBP24.77■■□□□ 1.56
SLIT3-204ENST00000518140 ACOT1Q86TX2 421 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 ERICH1Q86X53 443 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 USP38Q8NB14 1042 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 RNF169Q8NCN4 708 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 UBA3Q8TBC4 463 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 TSPAN18Q96SJ8 248 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 ZNF518BQ9C0D4 1074 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.77■■□□□ 1.56
SLIT3-204ENST00000518140 VDRP11473 427 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 ATF7P17544 494 aaPredicted RBP24.77■■□□□ 1.56
SLIT3-204ENST00000518140 PEX5P50542 639 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 RPL7AP62424 266 aaKnown RBP24.77■■□□□ 1.56
SLIT3-204ENST00000518140 ITIH3Q06033 890 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 CNGA2Q16280 664 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 PTPN20Q4JDL3 420 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 MMGT1Q8N4V1 131 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 PHF24Q9UPV7 400 aa24.77■■□□□ 1.56
SLIT3-204ENST00000518140 TCRBV5S1A1TA0A578 114 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 XPOTO43592 962 aaKnown RBP24.76■■□□□ 1.55
SLIT3-204ENST00000518140 LILRA4P59901 499 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 TUBB4BP68371 445 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 CC2D1AQ6P1N0 951 aaPredicted RBP24.76■■□□□ 1.55
SLIT3-204ENST00000518140 RASGEF1CQ8N431 466 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 ACTRT1Q8TDG2 376 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 HDAC7Q8WUI4 952 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 KBTBD7Q8WVZ9 684 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 LRRC1Q9BTT6 524 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 SELENOOQ9BVL4 669 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 DPEP3Q9H4B8 488 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 A0A0U1RQG5 324 aaPredicted RBP24.76■■□□□ 1.55
SLIT3-204ENST00000518140 ARVCFO00192 962 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 SPOPO43791 374 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 LMO2P25791 158 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 SGO2Q562F6 1265 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 OR6B3Q8NGW1 331 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 CPXM1Q96SM3 734 aa24.76■■□□□ 1.55
SLIT3-204ENST00000518140 MYO1FO00160 1098 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 SEC31AO94979 1220 aaKnown RBP24.75■■□□□ 1.55
SLIT3-204ENST00000518140 PDGFRBP09619 1106 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 LRPAP1P30533 357 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 TAF6P49848 677 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 SCNN1GP51170 649 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 AP1M1Q9BXS5 423 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 PARVAQ9NVD7 372 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 GDAP2Q9NXN4 497 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 L1RE1Q9UN81 338 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 PTPN22Q9Y2R2 807 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 CEP83Q9Y592 693 aa24.75■■□□□ 1.55
SLIT3-204ENST00000518140 M0QYV0 167 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 ZMYND10O75800 440 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 CALB1P05937 261 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 GPD2P43304 727 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 RTN4RL1Q86UN2 441 aaPredicted RBP24.74■■□□□ 1.55
SLIT3-204ENST00000518140 FEZF2Q8TBJ5 459 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 DEFB118Q96PH6 123 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.74■■□□□ 1.55
SLIT3-204ENST00000518140 TMEM59LQ9UK28 342 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 A0A0U1RQF3 1178 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 KBTBD13C9JR72 458 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 ZNF623O75123 536 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 VSNL1P62760 191 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 PPP1R26Q5T8A7 1209 aaPredicted RBP24.74■■□□□ 1.55
SLIT3-204ENST00000518140 PPP1R2P3Q6NXS1 205 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 ZNF560Q96MR9 790 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 TRAIPQ9BWF2 469 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 UBXN6Q9BZV1 441 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 WNT8AQ9H1J5 351 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 TSPYL2Q9H2G4 693 aaPredicted RBP24.74■■□□□ 1.55
SLIT3-204ENST00000518140 MRPL47Q9HD33 250 aaKnown RBP24.74■■□□□ 1.55
SLIT3-204ENST00000518140 FAM49BQ9NUQ9 324 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 TSPAN16Q9UKR8 245 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 GIT1Q9Y2X7 761 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 NR2E1Q9Y466 385 aa24.74■■□□□ 1.55
SLIT3-204ENST00000518140 MIF4GDA9UHW6 222 aaKnown RBP24.73■■□□□ 1.55
SLIT3-204ENST00000518140 THP07101 528 aa24.73■■□□□ 1.55
SLIT3-204ENST00000518140 PFKMP08237 780 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms