RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 CFHP08603 1231 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 FAM163BP0C2L3 166 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 ODC1P11926 461 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 PAX3P23760 479 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 ARHGAP25P42331 645 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 MAGEA1P43355 309 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 BRCC3P46736 316 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 OR1G1P47890 313 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 EPHB4P54760 987 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 CLEC16AQ2KHT3 1053 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 DCLRE1AQ6PJP8 1040 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 DSTYKQ6XUX3 929 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 ZNF662Q6ZS27 426 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 TMCO2Q7Z6W1 182 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-203ENST00000517921 KIAA1328Q86T90 577 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 UNC93AQ86WB7 457 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 OR6B3Q8NGW1 331 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 ZNF689Q96CS4 500 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM175Q9BSA9 504 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 PACSIN1Q9BY11 444 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 DPEP3Q9H4B8 488 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 MARCH5Q9NX47 278 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 TRIM10Q9UDY6 481 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 PUF60Q9UHX1 559 aaKnown RBP11.26□□□□□ -0.61
PABPC1-203ENST00000517921 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 TFR2Q9UP52 801 aa11.26□□□□□ -0.61
PABPC1-203ENST00000517921 PRG3Q9Y2Y8 225 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-203ENST00000517921 GOLGA6L9A6NEM1 432 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 PJA2O43164 708 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 ABL1P00519 1130 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 CYP1A1P04798 512 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 CYP11A1P05108 521 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 VDRP11473 427 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 GZMAP12544 262 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 UNGP13051 313 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 CD19P15391 556 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 GNL1P36915 607 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 SLC11A1P49279 550 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 NOMO3P69849 1222 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM240Q5SV17 173 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 C10orf76Q5T2E6 689 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 PSRC1Q6PGN9 363 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 TRIM72Q6ZMU5 477 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 ZNF365Q70YC5 407 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 TMEM86AQ8N2M4 240 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 SPATA18Q8TC71 538 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 LACRTQ9GZZ8 138 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 SNX25Q9H3E2 840 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 CWH43Q9H720 699 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 LUC7LQ9NQ29 371 aaKnown RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 STXBP5LQ9Y2K9 1186 aa11.25□□□□□ -0.61
PABPC1-203ENST00000517921 RANBP2P49792 3224 aaKnown RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 MTCL1Q9Y4B5 1905 aaKnown RBP11.25□□□□□ -0.61
PABPC1-203ENST00000517921 PLXNA3P51805 1871 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 FAM170AA1A519 330 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 ARHGEF37A1IGU5 675 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 A8MXQ7 604 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 TMCO5BA8MYB1 307 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 O00370 1275 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 NRP1O14786 923 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 MED7O43513 233 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 RTN2O75298 545 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 FGBP02675 491 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 GALTP07902 379 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 H2AFZP0C0S5 128 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 TYMPP19971 482 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 LMO2P25791 158 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 CDH5P33151 784 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-203ENST00000517921 CENPCQ03188 943 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 SGO2Q562F6 1265 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 NAA35Q5VZE5 725 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 NYAP1Q6ZVC0 841 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 H2AFVQ71UI9 128 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 ACOT1Q86TX2 421 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 PASD1Q8IV76 773 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 CMTR2Q8IYT2 770 aaKnown RBP11.24□□□□□ -0.61
PABPC1-203ENST00000517921 CRYBG2Q8N1P7 616 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.61
PABPC1-203ENST00000517921 TSGA10Q9BZW7 698 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 ISCUQ9H1K1 167 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 LZTFL1Q9NQ48 299 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
PABPC1-203ENST00000517921 CXXC1Q9P0U4 656 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-203ENST00000517921 ADAM28Q9UKQ2 775 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 DSEQ9UL01 958 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 INTUQ9ULD6 942 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
PABPC1-203ENST00000517921 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms