RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 PRKD1Q15139 912 aaPredicted RBP16■□□□□ 0.15
PCM1-204ENST00000517730 IZUMO2Q6UXV1 221 aa16■□□□□ 0.15
PCM1-204ENST00000517730 LRRC6Q86X45 466 aa16■□□□□ 0.15
PCM1-204ENST00000517730 CBWD2Q8IUF1 395 aa16■□□□□ 0.15
PCM1-204ENST00000517730 SIAH1Q8IUQ4 282 aa16■□□□□ 0.15
PCM1-204ENST00000517730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16■□□□□ 0.15
PCM1-204ENST00000517730 PPP2R3CQ969Q6 453 aa16■□□□□ 0.15
PCM1-204ENST00000517730 CCDC127Q96BQ5 260 aa16■□□□□ 0.15
PCM1-204ENST00000517730 VCPIP1Q96JH7 1222 aa16■□□□□ 0.15
PCM1-204ENST00000517730 FAM161BQ96MY7 647 aa16■□□□□ 0.15
PCM1-204ENST00000517730 PAFAH2Q99487 392 aa16■□□□□ 0.15
PCM1-204ENST00000517730 ECSITQ9BQ95 431 aa16■□□□□ 0.15
PCM1-204ENST00000517730 NDE1Q9NXR1 346 aa16■□□□□ 0.15
PCM1-204ENST00000517730 SCINQ9Y6U3 715 aa16■□□□□ 0.15
PCM1-204ENST00000517730 IRF6O14896 467 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 NDUFB10O96000 172 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 ZSCAN5DPP0CG00 497 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 AOC3Q16853 763 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 LIN52Q52LA3 116 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 TRIM72Q6ZMU5 477 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 TMEM179Q6ZVK1 233 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 STKLD1Q8NE28 680 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 PYROXD1Q8WU10 500 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 HAPLN3Q96S86 360 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 RIT2Q99578 217 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 NDNQ99608 321 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 GPAMQ9HCL2 828 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 SLC17A7Q9P2U7 560 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 POLLQ9UGP5 575 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 QSER1Q2KHR3 1735 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 A0A1B0GVG6 124 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 TSHRP16473 764 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 AMPD1P23109 780 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 VCPP55072 806 aaKnown RBP15.99■□□□□ 0.15
PCM1-204ENST00000517730 NOP14P78316 857 aaKnown RBP15.99■□□□□ 0.15
PCM1-204ENST00000517730 CCDC174Q6PII3 467 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 PHLDB2Q86SQ0 1253 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 ST13P4Q8IZP2 240 aaPredicted RBP15.99■□□□□ 0.15
PCM1-204ENST00000517730 NKD2Q969F2 451 aaPredicted RBP15.99■□□□□ 0.15
PCM1-204ENST00000517730 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 MIS12Q9H081 205 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 ZWILCHQ9H900 591 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 ZHX2Q9Y6X8 837 aa15.99■□□□□ 0.15
PCM1-204ENST00000517730 LPXNO60711 386 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 PENKP01210 267 aaPredicted RBP15.98■□□□□ 0.15
PCM1-204ENST00000517730 ITGAVP06756 1048 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 GLRA2P23416 452 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 NEK3P51956 506 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 ARL4CP56559 192 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 DNAL1Q4LDG9 190 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 HHIPL2Q6UWX4 724 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 MYLK4Q86YV6 388 aaPredicted RBP15.98■□□□□ 0.15
PCM1-204ENST00000517730 SCUBE1Q8IWY4 988 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 SLITRK1Q96PX8 696 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 CLUHO75153 1309 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 B2RBV5 119 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 KLF11O14901 512 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 BBOX1O75936 387 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 CFBP00751 764 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 MYL2P10916 166 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 TAL1P17542 331 aaPredicted RBP15.98■□□□□ 0.15
PCM1-204ENST00000517730 GJC1P36383 396 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 ENPEPQ07075 957 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 MAMLD1Q13495 774 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 TFDP1Q14186 410 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 FAM43BQ6ZT52 329 aaPredicted RBP15.98■□□□□ 0.15
PCM1-204ENST00000517730 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 ANKMY2Q8IV38 441 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 CERKQ8TCT0 537 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 ARHGEF1Q92888 912 aaKnown RBP15.98■□□□□ 0.15
PCM1-204ENST00000517730 PRR11Q96HE9 360 aaPredicted RBP15.98■□□□□ 0.15
PCM1-204ENST00000517730 TUBGCP5Q96RT8 1024 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 ARHGEF4Q9NR80 690 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 C1orf112Q9NSG2 853 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 KCNK4Q9NYG8 393 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 ATXN10Q9UBB4 475 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 IP6K2Q9UHH9 426 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 USTQ9Y2C2 406 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 TBC1D30Q9Y2I9 924 aa15.98■□□□□ 0.15
PCM1-204ENST00000517730 TM7SF2O76062 418 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 MT-ND3P03897 115 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 P4HBP07237 508 aaKnown RBP15.97■□□□□ 0.15
PCM1-204ENST00000517730 ZCCHC18P0CG32 403 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 ETS1P14921 441 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 PTPN7P35236 360 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 NCKAP1LP55160 1127 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 ACTR3P61158 418 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 OASLQ15646 514 aaKnown RBP15.97■□□□□ 0.15
PCM1-204ENST00000517730 CIAPIN1Q6FI81 312 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 PLEKHA7Q6IQ23 1121 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 DCAKDQ8WVC6 231 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 RBM17Q96I25 401 aaKnown RBP15.97■□□□□ 0.15
PCM1-204ENST00000517730 MFSD14AQ96MC6 490 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 ADAM33Q9BZ11 813 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 FARP1Q9Y4F1 1045 aaPredicted RBP15.97■□□□□ 0.15
PCM1-204ENST00000517730 IQANK1A0A1B0GTG1 560 aa15.97■□□□□ 0.15
PCM1-204ENST00000517730 DENND3A2RUS2 1198 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms