RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ZNF174Q15697 407 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 LONRF2Q1L5Z9 754 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 LRRC26Q2I0M4 334 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 TRIM60Q495X7 471 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 Q4G0T1 1027 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 DNAJC21Q5F1R6 531 aaKnown RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 EARS2Q5JPH6 523 aaKnown RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 ZBTB37Q5TC79 503 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 LRCH2Q5VUJ6 765 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 KIAA1211LQ6NV74 962 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 SWSAP1Q6NVH7 229 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 NIPA1Q7RTP0 329 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 NOSTRINQ8IVI9 506 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 MCATQ8IVS2 390 aaKnown RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 NDUFAF2Q8N183 169 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CPA6Q8N4T0 437 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 UBASH3BQ8TF42 649 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 SEPT1Q8WYJ6 367 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 FUBP3Q96I24 572 aaKnown RBP eCLIP3.04□□□□□ -1.92
SKP1-204ENST00000517691 GPR20Q99678 358 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 FOXP1Q9H334 677 aaPredicted RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 CXorf56Q9H5V9 222 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 RSAD1Q9HA92 442 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 CRTAC1Q9NQ79 661 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 DISC1Q9NRI5 854 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 TBC1D22BQ9NU19 505 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 SUSD2Q9UGT4 822 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 KLHL3Q9UH77 587 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 ACAD8Q9UKU7 415 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 DNM3Q9UQ16 869 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 TELO2Q9Y4R8 837 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 NR2E3Q9Y5X4 410 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 COL11A1P12107 1806 aaPredicted RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 BAZ2BQ9UIF8 2168 aaKnown RBP3.04□□□□□ -1.92
SKP1-204ENST00000517691 ELP1O95163 1332 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 PLXNB2O15031 1838 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 ZNF236Q9UL36 1845 aa3.04□□□□□ -1.92
SKP1-204ENST00000517691 IGLV3-22A0A075B6J6 115 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CYP3A7-CYP3A51PA0A087WV96 503 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 KIF28PB7ZC32 967 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 ARVCFO00192 962 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CLGNO14967 610 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 SLC37A4O43826 429 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 SUSD5O60279 629 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 BRINP1O60477 761 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 NEMFO60524 1076 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 UBOX5O94941 541 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 SNUPNO95149 360 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 LGALS2P05162 132 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 GCFC2P16383 781 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 SPINK2P20155 84 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CCND1P24385 295 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CYP3A7P24462 503 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 DEKP35659 375 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 STAT5BP51692 787 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 NKX3-2P78367 333 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TLE2Q04725 743 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TBX2Q13207 712 aaPredicted RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 DHCR24Q15392 516 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CALCRLQ16602 461 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 NKG7Q16617 165 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 KIAA0753Q2KHM9 967 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TTC38Q5R3I4 469 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 MIS18BP1Q6P0N0 1132 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 MIER3Q7Z3K6 550 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 FGD2Q7Z6J4 655 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 UBE3DQ7Z6J8 389 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 UBE2Q1Q7Z7E8 422 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 PPFIBP1Q86W92 1011 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TMEM192Q8IY95 271 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 SLFN12Q8IYM2 578 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 PPM1KQ8N3J5 372 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 FAM26EQ8N5C1 309 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 KCT2Q8NC54 265 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 FRS2Q8WU20 508 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CRYGNQ8WXF5 182 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 CCT6BQ92526 530 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TTC17Q96AE7 1141 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 INTS4Q96HW7 963 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 TBATAQ96M53 351 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 RIT2Q99578 217 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 KATNAL1Q9BW62 490 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TEKT3Q9BXF9 490 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 AP1M1Q9BXS5 423 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TMPRSS13Q9BYE2 586 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TRPV6Q9H1D0 765 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 SMARCAD1Q9H4L7 1026 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TCF7L1Q9HCS4 588 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TRMT13Q9NUP7 481 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 INTS7Q9NVH2 962 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 CRIM1Q9NZV1 1036 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 ZNF215Q9UL58 517 aaPredicted RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 PNMA8BQ9ULN7 279 aaPredicted RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 ZMYND8Q9ULU4 1186 aaPredicted RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 ANKRD6Q9Y2G4 727 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 SPEF1Q9Y4P9 236 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 TNPO3Q9Y5L0 923 aaKnown RBP3.03□□□□□ -1.92
SKP1-204ENST00000517691 MGAMO43451 1857 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 PARP14Q460N5 1801 aa3.03□□□□□ -1.92
SKP1-204ENST00000517691 GRIN2DO15399 1336 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms