RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 NOTCH4Q99466 2003 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 KXD1Q9BQD3 176 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 ACBD6Q9BR61 282 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 ASAH2Q9NR71 780 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 ABI2Q9NYB9 513 aaPredicted RBP15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 GDE1Q9NZC3 331 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 HSFX1Q9UBD0 423 aa15.13■□□□□ 0.01
PDGFRB-202ENST00000517488 GADD45BO75293 160 aaPredicted RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 MICAL2O94851 1124 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 CFHP08603 1231 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 HAPLN1P10915 354 aaPredicted RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 SRFP11831 508 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 ATF6P18850 670 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 LHX1P48742 406 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 TUFMP49411 452 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 VCPP55072 806 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 MYL6P60660 151 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 DLG4P78352 724 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 CLDN10P78369 228 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 MYL7Q01449 175 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 SMARCB1Q12824 385 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 INTS6LQ5JSJ4 861 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 TDRD10Q5VZ19 366 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 CEP135Q66GS9 1140 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 MTSS1LQ765P7 747 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 SUGP1Q8IWZ8 645 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 SHKBP1Q8TBC3 707 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 SPATA18Q8TC71 538 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 C2orf15Q8WU43 125 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 ZSWIM3Q96MP5 696 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 PKMYT1Q99640 499 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 LPIN3Q9BQK8 851 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 XYLT2Q9H1B5 865 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 GTF3C4Q9UKN8 822 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 FBXL21Q9UKT6 434 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 PCDHB5Q9Y5E4 795 aa15.12■□□□□ 0.01
PDGFRB-202ENST00000517488 MYBPHLA2RUH7 354 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 ATP2C2O75185 946 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 C4BPAP04003 597 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 NR2F2P24468 414 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 LMO2P25791 158 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 GPR15P49685 360 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 GPC5P78333 572 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 TRPC3Q13507 836 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 TEAD2Q15562 447 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 NFIL3Q16649 462 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 FAM78AQ5JUQ0 283 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 C1orf220Q5T0J3 134 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 IER5LQ5T953 404 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 TANGO2Q6ICL3 276 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 DPH6Q7L8W6 267 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 LEMD2Q8NC56 503 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 SPPL2BQ8TCT7 592 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 GPR152Q8TDT2 470 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 GIPC2Q8TF65 315 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 PSMG2Q969U7 264 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 ELMO3Q96BJ8 720 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 MMS19Q96T76 1030 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 MRPL45Q9BRJ2 306 aaKnown RBP15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 FRMD4BQ9Y2L6 1034 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 ASB3Q9Y575 518 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 PCDHA5Q9Y5H7 936 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 WDFY4Q6ZS81 3184 aa15.11■□□□□ 0.01
PDGFRB-202ENST00000517488 A0A1W2PRU2 124 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 PHACTR2O75167 634 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 AKAP3O75969 853 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 VNN1O95497 513 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 PDGFRBP09619 1106 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 NPR3P17342 541 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 WARSP23381 471 aaKnown RBP15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 FCARP24071 287 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 PCSK1P29120 753 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 AVPR2P30518 371 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 BIRC3Q13489 604 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 NFE2Q16621 373 aaPredicted RBP15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 WDR72Q3MJ13 1102 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 ZCWPW2Q504Y3 356 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 GAREM2Q75VX8 874 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 SIX5Q8N196 739 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 SPATA20Q8TB22 786 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 TMC2Q8TDI7 906 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 ASB16Q96NS5 453 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 SLC2A4RGQ9NR83 387 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 NXF1Q9UBU9 619 aaKnown RBP15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 WNT16Q9UBV4 365 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 NME7Q9Y5B8 376 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 TSC2P49815 1807 aa15.1■□□□□ 0.01
PDGFRB-202ENST00000517488 MUC6Q6W4X9 2439 aa15.09■□□□□ 0.01
PDGFRB-202ENST00000517488 KRBA1A5PL33 1030 aa15.09■□□□□ 0.01
PDGFRB-202ENST00000517488 ECI2O75521 394 aa15.09■□□□□ 0.01
PDGFRB-202ENST00000517488 SMC2O95347 1197 aa15.09■□□□□ 0.01
PDGFRB-202ENST00000517488 STAU1O95793 577 aaKnown RBP15.09■□□□□ 0.01
PDGFRB-202ENST00000517488 CYP2F1P24903 491 aa15.09■□□□□ 0.01
PDGFRB-202ENST00000517488 PRCPP42785 496 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms