RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 DSC2Q02487 901 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MTMR1Q13613 665 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KIF22Q14807 665 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCBP2Q15366 365 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TBCCQ15814 346 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RBM20Q5T481 1227 aaKnown RBP3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF618Q5T7W0 954 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZNF425Q6IV72 752 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ANKRD16Q6P6B7 361 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 VGLL2Q8N8G2 317 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TBC1D5Q92609 795 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NELL2Q99435 816 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TINAGL1Q9GZM7 467 aaPredicted RBP3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ARHGEF3Q9NR81 526 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SERTAD4Q9NUC0 356 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RAD54BQ9Y620 910 aa3.36□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KRTAP29-1A8MX34 341 aaPredicted RBP3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TARM1B6A8C7 271 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 JTBO76095 146 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CCND1P24385 295 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 GCLCP48506 637 aaPredicted RBP3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ALDH9A1P49189 494 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 EIF2B5Q13144 721 aaKnown RBP3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MTX3Q5HYI7 312 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SFRP4Q6FHJ7 346 aaPredicted RBP3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC29A4Q7RTT9 530 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PPP1R32Q7Z5V6 425 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FAM90A1Q86YD7 464 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FAM109AQ8N4B1 249 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KLHDC4Q8TBB5 520 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FBXO41Q8TF61 875 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 RGMAQ96B86 450 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FAM167AQ96KS9 214 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SMOC2Q9H3U7 446 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLAMF7Q9NQ25 335 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NRIP3Q9NQ35 241 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SERPINB13Q9UIV8 391 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SPEF1Q9Y4P9 236 aa3.35□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TLR5O60602 858 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 VPS4BO75351 444 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KIF20AO95235 890 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 ONECUT2O95948 504 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 FAM163BP0C2L3 166 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PRR35P0CG20 571 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 KELP23276 732 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PCSK6P29122 969 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CTGFP29279 349 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PTGER1P34995 402 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TUBA4AP68366 448 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SSBP2P81877 361 aaPredicted RBP3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TFF2Q03403 129 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 MAPK7Q13164 816 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 NOGQ13253 232 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PTPN21Q16825 1174 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 TMEM119Q4V9L6 283 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SLC44A4Q53GD3 710 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 AARS2Q5JTZ9 985 aaKnown RBP3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 WDR53Q7Z5U6 358 aaPredicted RBP3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 USP37Q86T82 979 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DTX2Q86UW9 622 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CPA6Q8N4T0 437 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 CCDC8Q9H0W5 538 aaPredicted RBP3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 DKK3Q9UBP4 350 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SERGEFQ9UGK8 458 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 SH2B3Q9UQQ2 575 aa3.34□□□□□ -1.87
SCARNA16.2-201ENST00000516520 PRSS29PA6NIE9 313 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 M0QYG6 137 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 QSOX1O00391 747 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SLC16A3O15427 465 aaKnown RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 KATNA1O75449 491 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LATS1O95835 1130 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CHRM3P20309 590 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 EPHB2P29323 1055 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 RECQLP46063 649 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 CDKN1CP49918 316 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 HK3P52790 923 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PROSER3Q2NL68 480 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MORN5Q5VZ52 161 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 FAM160B1Q5W0V3 765 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ICE2Q659A1 982 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF626Q68DY1 528 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LAYNQ6UX15 382 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ZNF782Q6ZMW2 699 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 HEATR3Q7Z4Q2 680 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 NEK8Q86SG6 692 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 FANCBQ8NB91 859 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 TNPO1Q92973 898 aaKnown RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 RPL36ALQ969Q0 106 aaKnown RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 C1orf43Q9BWL3 253 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 MRPL46Q9H2W6 279 aaKnown RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LMBRD1Q9NUN5 540 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 SH3BP4Q9P0V3 963 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 ABCF2Q9UG63 623 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 AGAP1Q9UPQ3 857 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PCDHA3Q9Y5H8 950 aa3.33□□□□□ -1.88
SCARNA16.2-201ENST00000516520 LRRC14BA6NHZ5 514 aa3.32□□□□□ -1.88
SCARNA16.2-201ENST00000516520 PPM1DO15297 605 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms