RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 CPA5Q8WXQ8 436 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 TSC1Q92574 1164 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 WNT8BQ93098 351 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 PGBD4Q96DM1 585 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 PLVAPQ9BX97 442 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 SDCBP2Q9H190 292 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 UNC93B1Q9H1C4 597 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 UBN1Q9NPG3 1134 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 STARD7Q9NQZ5 370 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 PARVAQ9NVD7 372 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 GDAP2Q9NXN4 497 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 TSC2P49815 1807 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 TARSL2A2RTX5 802 aaKnown RBP12.68□□□□□ -0.38
LMNA-224ENST00000515711 CCDC66A2RUB6 948 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 PIRO00625 290 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 ATMINO43313 823 aaPredicted RBP12.68□□□□□ -0.38
LMNA-224ENST00000515711 PAX3P23760 479 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 MAN1A1P33908 653 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 ZNF394Q53GI3 561 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 SGO2Q562F6 1265 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 SCARA3Q6AZY7 606 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 MRPL10Q7Z7H8 261 aaKnown RBP12.68□□□□□ -0.38
LMNA-224ENST00000515711 RASGEF1CQ8N431 466 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 SLC4A11Q8NBS3 891 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 SPATA4Q8NEY3 305 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 PSMB7Q99436 277 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 C11orf70Q9BRQ4 267 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 WDR35Q9P2L0 1181 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 ANAPC7Q9UJX3 599 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 TTC7AQ9ULT0 858 aaPredicted RBP12.68□□□□□ -0.38
LMNA-224ENST00000515711 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
LMNA-224ENST00000515711 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.68□□□□□ -0.38
LMNA-224ENST00000515711 ALG6Q9Y672 507 aa12.68□□□□□ -0.38
LMNA-224ENST00000515711 CCDC188H7C350 402 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 MYO1FO00160 1098 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 PDE2AO00408 941 aaPredicted RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 DNM1LO00429 736 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 DDX3YO15523 660 aaKnown RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 SPOPO43791 374 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 ZNF623O75123 536 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 CALCAP01258 141 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 SETSIPP0DME0 302 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 GHRP10912 638 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 RRM1P23921 792 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 CXCR5P32302 372 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 MAGEA10P43363 369 aaPredicted RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 PTP4A2Q12974 167 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 DSC3Q14574 896 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 MESDQ14696 234 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 NAA30Q147X3 362 aaPredicted RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 BRD3Q15059 726 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 CNGA2Q16280 664 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 GLE1Q53GS7 698 aaKnown RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 SEL1L2Q5TEA6 688 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 DNAJC24Q6P3W2 148 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 DPH6Q7L8W6 267 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 ERICH1Q86X53 443 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 PDCL2Q8N4E4 241 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 TOP6BLQ8N6T0 577 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 C1orf131Q8NDD1 294 aaKnown RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 C18orf25Q96B23 403 aaPredicted RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 ZSWIM1Q9BR11 485 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
LMNA-224ENST00000515711 ELOVL4Q9GZR5 314 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
LMNA-224ENST00000515711 KLK14Q9P0G3 267 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 PADI3Q9ULW8 664 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
LMNA-224ENST00000515711 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 GOLGA6L10A0A0M3HER8 536 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 CCDC151A5D8V7 595 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 KPNA7A9QM74 516 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 ARVCFO00192 962 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 CEP104O60308 925 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 ERLIN1O75477 346 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
LMNA-224ENST00000515711 THP07101 528 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 COMTP21964 271 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 CTNNA1P35221 906 aaKnown RBP12.66□□□□□ -0.38
LMNA-224ENST00000515711 DNA2P51530 1060 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 NDST1P52848 882 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 CDH8P55286 799 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 SNX16P57768 344 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 LPIN1Q14693 890 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 LCLAT1Q6UWP7 414 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 NOA1Q8NC60 698 aaKnown RBP12.66□□□□□ -0.38
LMNA-224ENST00000515711 C3orf20Q8ND61 904 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 APPL2Q8NEU8 664 aa12.66□□□□□ -0.38
LMNA-224ENST00000515711 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms